DRSC/TRiP Functional Genomics Resources

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Protein Alignment SpdS and SPDS3

DIOPT Version :10

Sequence 1:NP_731384.1 Gene:SpdS / 41167 FlyBaseID:FBgn0037723 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_001190527.1 Gene:SPDS3 / 835392 AraportID:AT5G53120 Length:386 Species:Arabidopsis thaliana


Alignment Length:326 Identity:127/326 - (38%)
Similarity:197/326 - (60%) Gaps:48/326 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NGWFSE--------------LQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETETYGRCLILDG 56
            :|||||              ....:|||::.||||::|:.|:||.||::.:.|:.|||:.|:|||
plant    53 SGWFSEPHPRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDG 117

  Fly    57 IIQCTARDEFSYQEMISFLPLCAHPNPK---------------------------KVLIVGGGDG 94
            |:|.|.:||.:|||||:.||||:..:||                           |||:||||||
plant   118 IVQLTEKDECAYQEMIAHLPLCSISSPKNVISHLKKFSLSGFLYLVACCNKSVNLKVLVVGGGDG 182

  Fly    95 GVAREVVKHPLVEEVHQVEIDDRVVELSKQYLPAMACGFANEKLKLTIGDGFDYMKKH-KNEFDV 158
            ||.||:.:|..||.:...|||..|:::||::.|.:|.||.:.:::|.|||..::::|. :.::|.
plant   183 GVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDA 247

  Fly   159 IITDSSDPIGPAVSLFQESYYELMKHALKDDGIVCSQGGSFWLDLDYIKKTMSGCKEHFAKVAYA 223
            ||.|||||:|||::|.::.::|.:..|||..|::|:...|.||....|:..:|.|::.|..|.||
plant   248 IIVDSSDPVGPALALVEKPFFETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFKSVHYA 312

  Fly   224 VTSVPSYPCGHIGFVMGSL-NKNQDFATP-----KLGKSEIDSIDLRYYSSEVHSAAFALPRWVQ 282
            .:|||:||.|.||||:.|. ....||..|     ||..:.....:|::|:|::|.||||||.:::
plant   313 WSSVPTYPSGVIGFVLCSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLR 377

  Fly   283 K 283
            :
plant   378 R 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpdSNP_731384.1 AdoMet_MTases 1..283 CDD:473071 127/324 (39%)
SPDS3NP_001190527.1 PLN02366 38..386 CDD:215208 127/326 (39%)

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