DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SpdS and SPBC12C2.07c

DIOPT Version :9

Sequence 1:NP_001247005.1 Gene:SpdS / 41167 FlyBaseID:FBgn0037723 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_596015.1 Gene:SPBC12C2.07c / 2539919 PomBaseID:SPBC12C2.07c Length:298 Species:Schizosaccharomyces pombe


Alignment Length:281 Identity:139/281 - (49%)
Similarity:201/281 - (71%) Gaps:4/281 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LNNGWFSELQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETETYGRCLILDGIIQCTARDEFSY 68
            :.:|||.|:. ::||||:.:||||:|::..||::||:.:.|:||||..|:|||.||.|.||||||
pombe    11 IKDGWFREIN-NMWPGQAMTLKVKKVLYAGKSKYQDVLVFESETYGHVLVLDGAIQATERDEFSY 74

  Fly    69 QEMISFLPLCAHPNPKKVLIVGGGDGGVAREVVKHPLVEEVHQVEIDDRVVELSKQYLPAMACGF 133
            ||||:.|.|.:||||||||::|||||||.||||||..|||....:||:.|:::||||||.|:.||
pombe    75 QEMIAHLALNSHPNPKKVLVIGGGDGGVLREVVKHECVEEAILCDIDEDVIKVSKQYLPEMSAGF 139

  Fly   134 ANEKLKLTIGDGFDYMKKHKNEFDVIITDSSDPIGPAVSLFQESYYELMKHALKDDGIVCSQGGS 198
            .:.|:|:.|||||.:::.::|.|||||||||||.|||.:|||:.|::|:..||:..|::.:|...
pombe   140 NHPKVKVHIGDGFKFLQDYQNTFDVIITDSSDPDGPAEALFQKPYFQLLSDALRGGGVITTQAEC 204

  Fly   199 FWLDLDYIKKTMSGCKEHFAKVAYAVTSVPSYPCGHIGFVMGSLNKNQDFATP--KLGKSEIDSI 261
            .|:.|..|...::..|..|..|.||.|::|:||.|.||||:.|.:.:.|.:.|  |....|.:.:
pombe   205 MWIHLGVISNVLTAVKTVFPNVRYAYTTIPTYPSGSIGFVVASKDASIDLSKPLRKWSPEEENKL 269

  Fly   262 DLRYYSSEVHSAAFALPRWVQ 282
             .:||:||:|:|:|.||.:.:
pombe   270 -CKYYNSEIHAASFVLPTFAR 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpdSNP_001247005.1 AdoMet_MTases 1..283 CDD:302624 139/281 (49%)
SPBC12C2.07cNP_596015.1 PLN02366 7..293 CDD:215208 139/281 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 202 1.000 Domainoid score I642
eggNOG 1 0.900 - - E1_COG0421
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40514
Inparanoid 1 1.050 292 1.000 Inparanoid score I630
OMA 1 1.010 - - QHG54216
OrthoFinder 1 1.000 - - FOG0002410
OrthoInspector 1 1.000 - - oto101996
orthoMCL 1 0.900 - - OOG6_100634
Panther 1 1.100 - - LDO PTHR11558
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1380
SonicParanoid 1 1.000 - - X1601
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.