DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and CRT3

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_563816.1 Gene:CRT3 / 837365 AraportID:AT1G08450 Length:424 Species:Arabidopsis thaliana


Alignment Length:411 Identity:184/411 - (44%)
Similarity:260/411 - (63%) Gaps:17/411 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLLATVGFISAEVYLKENFDNENWEDTWIYS---KHPGKEFGKFVLTPGTFYNDAEADKGIQTS 69
            ::.||.:.|  :|::|:|:|:. .|:..|:.|   ::.||. |.|..|.|.:..|.: :|||||.
plant    19 VLTLAPLAF--SEIFLEEHFEG-GWKSRWVLSDWKRNEGKA-GTFKHTAGKWPGDPD-NKGIQTY 78

  Fly    70 QDARFYAASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGP 134
            .||:.||.|.|...|||:::.||||:|||.||:|:|||.|:||....::|....|::||.:||||
plant    79 NDAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGP 143

  Fly   135 DICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDD 199
            ||||..|||:|||.||:|:|:.|.||::|:.|...||||.|:|||.:|.||:||::.|.|::..|
plant   144 DICGTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTD 208

  Fly   200 WDFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDK-PEHIPDPDATKPEDWDDEMDGEWEP 263
            ||.|.|:|||...|.||||||||..|.||:|.|||.:|. |..|||..|.:|||||:|.:|.|||
plant   209 WDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDSIPREIPDRKAKEPEDWDEEENGLWEP 273

  Fly   264 PMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFD 328
            |.|.|..:||.|:.|::.||||||.|::|.|.|||:..|..||:.|.|...|.::||||:|:|||
plant   274 PKIPNSAYKGPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIEVWQVKAGSIFD 338

  Fly   329 NVLITDDVELAAKAAAEVKNTQAGEKKMKEAQDEVQRK-KDEEEAKKASDKDDEDEDDDDEEKDD 392
            |:||.||...|.....:........:|...|:.|.:|| :::|||:.|.::.:....:.|....|
plant   339 NILICDDPAYARSIVDDYFAQHRESEKELFAEAEKERKAREDEEARIAREEGERRRKERDHRYGD 403

  Fly   393 ESK-------QDKDQSEHDEL 406
            ..:       :|.....||||
plant   404 RRRRYKRPNPRDYMDDYHDEL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 158/310 (51%)
CRT3NP_563816.1 Calreticulin 34..342 CDD:278680 158/310 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 278 1.000 Domainoid score I407
eggNOG 1 0.900 - - E1_KOG0674
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 428 1.000 Inparanoid score I424
OMA 1 1.010 - - QHG53836
OrthoDB 1 1.010 - - D822188at2759
OrthoFinder 1 1.000 - - FOG0002317
OrthoInspector 1 1.000 - - otm3044
orthoMCL 1 0.900 - - OOG6_102266
Panther 1 1.100 - - O PTHR11073
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1529
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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