DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and CNX1

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_200987.1 Gene:CNX1 / 836301 AraportID:AT5G61790 Length:530 Species:Arabidopsis thaliana


Alignment Length:445 Identity:151/445 - (33%)
Similarity:210/445 - (47%) Gaps:107/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLLATVGF-----ISAEVYLKENFD-----------NENWEDTWIYSKHPGKEFGKFVLTPGTF 56
            ::|||.|.|     ...:..|.|:||           |.::|..|.::|..|.|           
plant    11 LLLLAFVSFQKLCYCDDQTVLYESFDEPFDGRWIVSKNSDYEGVWKHAKSEGHE----------- 64

  Fly    57 YNDAEADKGIQTSQDARFYAASRKFDGFSN-EDKPLVVQFSVKHEQNIDCGGGYVKLF---DCSL 117
                  |.|:..|:.||.|...::.|...| ::..:|:|:.|:.::.::|||.|:|..   :...
plant    65 ------DYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGW 123

  Fly   118 DQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGK------NHLISKDIRCKDDVYTHFYTLIV 176
            .......||||.||||||.|| ||.|||.|..:|..      .|.:........|..:|.||.|:
plant   124 TPQGFDSESPYSIMFGPDKCG-GTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAIL 187

  Fly   177 RPDNTYEVLIDNEKVESGNLEDDWDF---LAP-KKIKDPTATKPEDWDDRATIPDPDDKKPEDW- 236
            :|||...:|:|.|:.:..||....||   |.| |.|.||...||||||:||.||||:..||||| 
plant   188 KPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWD 252

  Fly   237 --------------------DKPEHIPDPDATKPEDWDDEMDGEWEPPMIDNPE----------- 270
                                |:||.:.||:||||||||||.||.||.|.||||:           
plant   253 EDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWK 317

  Fly   271 --------FKGEWQPKQLDNPNYKGAWEHPEIANPEYV----PDDKLYLRKEICTLGFDLWQVKS 323
                    :||:|....:|||.|||.|:..:|.||:|.    ||     .:.|..:|.::|.::.
plant   318 RPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRPD-----YEPIAAIGIEIWTMQD 377

  Fly   324 GTIFDNVLITDDVELAAKAAAEVKNTQAGEKKMKEAQD-EVQRKKDEEEAKKASD 377
            |.:|||:||..|    .|.|...:.|     ..|...| |.:::|.||||..::|
plant   378 GILFDNILIAKD----EKVAETYRQT-----TWKPKFDVEKEKQKAEEEAAGSAD 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 130/375 (35%)
CNX1NP_200987.1 Calreticulin 31..386 CDD:395201 131/377 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53836
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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