DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Calr and Calr

DIOPT Version :10

Sequence 1:NP_524293.2 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_071794.1 Gene:Calr / 64202 RGDID:620288 Length:416 Species:Rattus norvegicus


Alignment Length:414 Identity:271/414 - (65%)
Similarity:320/414 - (77%) Gaps:14/414 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TVIVLLATVGFISAE--VYLKENF-DNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQ 67
            :|.:||..:|..:|:  :|.||.| |.:.|.:.|:.|||. .:||||||:.|.||.|.|.|||:|
  Rat     4 SVPLLLGLLGLAAADPAIYFKEQFLDGDAWTNRWVESKHK-SDFGKFVLSSGKFYGDQEKDKGLQ 67

  Fly    68 TSQDARFYAASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMF 132
            |||||||||.|.:|:.|||:.:.|||||:|||||||||||||||||...|||.||||:|.|.|||
  Rat    68 TSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYNIMF 132

  Fly   133 GPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLE 197
            ||||||||||||||||:|||||.||:||||||||.:||.|||||||||||||.|||.:||||:||
  Rat   133 GPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197

  Fly   198 DDWDFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDKPEHIPDPDATKPEDWDDEMDGEWE 262
            ||||||.|||||||.|.||||||:||.|.||.|.||||||||||||||||.||||||:|||||||
  Rat   198 DDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWE 262

  Fly   263 PPMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIF 327
            ||:|.|||:||||:|:|:|||:|||.|.||||.||||.||..:|.......||.|||||||||||
  Rat   263 PPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIF 327

  Fly   328 DNVLITDDVELAAKAAAEVKN-TQAGEKKMKEAQDEVQRKKDEEEAKK------ASDKDDEDEDD 385
            ||.|||:|...|.:...|... |:|.||:||:.|||.||.|:|||.||      |.||:|||:.|
  Rat   328 DNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRD 392

  Fly   386 DDEEKDDESKQDKDQS---EHDEL 406
            :||:::||.::|::.:   ..|||
  Rat   393 EDEDEEDEKEEDEEDATGQAKDEL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_524293.2 Calreticulin 25..332 CDD:459737 226/307 (74%)
CalrNP_071794.1 N-domain 18..197 128/181 (71%)
Calreticulin 23..332 CDD:459737 228/309 (74%)
4 X approximate repeats 191..255 52/63 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..277 68/83 (82%)
P-domain 198..308 83/109 (76%)
Interaction with PPIB. /evidence=ECO:0000250 237..270 28/32 (88%)
3 X approximate repeats 259..297 27/37 (73%)
C-domain 309..416 53/106 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..416 30/64 (47%)
Prevents secretion from ER 413..416

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