DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Calr and Cnx14D

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_573131.1 Gene:Cnx14D / 32620 FlyBaseID:FBgn0264077 Length:639 Species:Drosophila melanogaster


Alignment Length:600 Identity:177/600 - (29%)
Similarity:251/600 - (41%) Gaps:215/600 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMWCKTVIVLL----ATVGFISAEVYLKENFDNENWEDTWIYSKHPGKEFG--KF-----VLTPG 54
            |.|.....:||    |..|:::.|   .||    :.||..|   .||..:|  ||     |:...
  Fly     1 MAWKMLFAILLLLSAAKTGYLAPE---SEN----SVEDVQI---EPGAIYGDEKFAYKSPVIDAE 55

  Fly    55 TFY-----NDAEA--------------------------------------DKGIQTSQDARFYA 76
            .||     :|.||                                      |.|:.....|:..|
  Fly    56 KFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAA 120

  Fly    77 AS----RKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDM---HGESPYEIMFGP 134
            .:    :.||..||  ||||||:.:..::..||||.|:||.........:   :.::||.|||||
  Fly   121 IAAPFRQPFDFKSN--KPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGP 183

  Fly   135 DICGPGTKKVHVIFSYKGKNHLISKDIRCK----------DDVYTHFYTLIVRPDNTYEVLIDNE 189
            |.|| ...|:|.||.:....:....:..||          .|...|.|.|:|||||::|:.:|::
  Fly   184 DKCG-NNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHK 247

  Fly   190 KVESGNLEDDW--DFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDK--PEHIP------- 243
            .::.|:|..|:  ....|.:|.||...|||.||:|..||||:..||||||:  |.|:|       
  Fly   248 IIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMP 312

  Fly   244 ------------DPDATKPEDWDDEMDGEWEPPMIDNPEFK-----GEWQPKQLDNPNYKGAWEH 291
                        ||.|.:||||:.|:|||||.|:::||..|     |:|:...:.||||||.|..
  Fly   313 NGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSA 377

  Fly   292 P--------------EIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVEL---- 338
            |              :||||::..|.|.:....|..:|.:||.:.|..:|||::|||||||    
  Fly   378 PMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDF 442

  Fly   339 -----------------------------------------------------------AAK--A 342
                                                                       |||  |
  Fly   443 AANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAA 507

  Fly   343 AAEVKNTQ----------AGEKKMKEAQDEVQRKKDEE--------EAKKASDKDDE------DE 383
            ||..|.|.          ..|:|:::.:.|.::|::||        |.||..:||||      :|
  Fly   508 AAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEE 572

  Fly   384 DDDDEEKDDESKQDK 398
            ::||||||||.|.|:
  Fly   573 EEDDEEKDDEEKTDE 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 131/415 (32%)
Cnx14DNP_573131.1 Calreticulin 59..432 CDD:278680 118/375 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46798
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11073
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R163
SonicParanoid 00.000 Not matched by this tool.
44.040

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