DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Calr and calr

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_956007.2 Gene:calr / 325317 ZFINID:ZDB-GENE-030131-4042 Length:417 Species:Danio rerio


Alignment Length:408 Identity:253/408 - (62%)
Similarity:320/408 - (78%) Gaps:5/408 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MWCKTVIVLLATVGFISAE--VYLKENF-DNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEAD 63
            |...:::.:..:|..|:||  ||.:|.| |.::|...|:.|||. .::|||||:.|.||.|||.|
Zfish     1 MTALSLLFMAVSVALITAESNVYFREQFEDGDSWRSRWVESKHK-TDYGKFVLSAGKFYGDAEKD 64

  Fly    64 KGIQTSQDARFYAASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPY 128
            ||:||||||.|||.|.:|..|:|:|:|||:||||||||||||||||:|||...|:|.||||:|.|
Zfish    65 KGLQTSQDAHFYAMSARFGDFNNKDQPLVIQFSVKHEQNIDCGGGYIKLFPSDLNQEDMHGDSTY 129

  Fly   129 EIMFGPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVES 193
            .|||||||||||||||||||:||||||||:||||||||.|:|.|||||.|||||||.|||:||||
Zfish   130 NIMFGPDICGPGTKKVHVIFNYKGKNHLINKDIRCKDDEYSHLYTLIVNPDNTYEVKIDNKKVES 194

  Fly   194 GNLEDDWDFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDKPEHIPDPDATKPEDWDDEMD 258
            |:||:|||||..||||||.|.||||||:|..|.||:|:|||:|||||:||||||.||:|||:|||
Zfish   195 GSLEEDWDFLPSKKIKDPEAKKPEDWDEREKIDDPEDQKPEEWDKPENIPDPDAKKPDDWDEEMD 259

  Fly   259 GEWEPPMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKS 323
            |||||||:.||::||||:|:|:|||.|||.|.||||.||||..|.::|....|..:|.|||||||
Zfish   260 GEWEPPMVTNPDYKGEWKPRQIDNPAYKGKWVHPEIDNPEYTADSEIYKYDSIGVIGLDLWQVKS 324

  Fly   324 GTIFDNVLITDDVELAAKAAAEVKN-TQAGEKKMKEAQDEVQRKKDEEEAKKASDKDDEDEDDDD 387
            ||||||.|||:|.:||.:...|... |:..||||||:|:|..|||.:||.|...::..|:|:::.
Zfish   325 GTIFDNFLITNDPKLAEEVGTETWGATKDAEKKMKESQEEEDRKKHDEEEKSRKEEAKEEEEEEK 389

  Fly   388 EEKDDESKQDKDQSEHDE 405
            ||:|:|.::::::.:.:|
Zfish   390 EEEDEEEEEEEEEEDEEE 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 217/307 (71%)
calrNP_956007.2 Calreticulin 24..333 CDD:278680 217/309 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 375 1.000 Domainoid score I831
eggNOG 1 0.900 - - E1_KOG0674
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37911
Inparanoid 1 1.050 557 1.000 Inparanoid score I1072
OMA 1 1.010 - - QHG53836
OrthoDB 1 1.010 - - D351852at33208
OrthoFinder 1 1.000 - - FOG0002317
OrthoInspector 1 1.000 - - otm24449
orthoMCL 1 0.900 - - OOG6_102266
Panther 1 1.100 - - LDO PTHR11073
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R163
SonicParanoid 1 1.000 - - X1529
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.870

Return to query results.
Submit another query.