DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Calr and calr3a

DIOPT Version :10

Sequence 1:NP_524293.2 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_571122.2 Gene:calr3a / 30248 ZFINID:ZDB-GENE-000208-17 Length:418 Species:Danio rerio


Alignment Length:404 Identity:261/404 - (64%)
Similarity:313/404 - (77%) Gaps:7/404 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLLATVGFIS-AEVYLKENF-DNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQTSQ 70
            :..::.:.||: |:||.||.| |.:.|:..|:.|||. .::|::.||.|.||.|||.|||:||||
Zfish     7 VCFISALAFIAHADVYFKEQFLDGDGWKSRWVESKHK-SDYGQWKLTSGKFYGDAELDKGLQTSQ 70

  Fly    71 DARFYAASRKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPD 135
            ||||||.|.:||.||||.|.||:||:|||||.|||||||||:|...:|||:|||||.|.||||||
Zfish    71 DARFYALSSRFDSFSNEGKTLVIQFTVKHEQKIDCGGGYVKVFPAEMDQTEMHGESQYYIMFGPD 135

  Fly   136 ICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDW 200
            |||..||||||||:|||:||||.|||:||||..||.||||:|||.||||.|||||||||:||:||
Zfish   136 ICGYSTKKVHVIFNYKGQNHLIKKDIKCKDDELTHLYTLILRPDQTYEVKIDNEKVESGSLEEDW 200

  Fly   201 DFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDKPEHIPDPDATKPEDWDDEMDGEWEPPM 265
            |||.|||||||.|.||:||||||.|.||:|.|||||||||:||||||.||:|||::|||||||.|
Zfish   201 DFLPPKKIKDPEAKKPDDWDDRAKIDDPEDTKPEDWDKPENIPDPDAKKPDDWDEDMDGEWEPAM 265

  Fly   266 IDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNV 330
            |.|||:||||:|||:|||:|||.|.||||.||||..||.:|....|..||.|||||||||||||.
Zfish   266 IPNPEYKGEWKPKQIDNPSYKGTWVHPEIDNPEYAADDAIYKFDSIGVLGLDLWQVKSGTIFDNF 330

  Fly   331 LITDDVELAAKAAAEVKN-TQAGEKKMKEAQDEVQRKKDEEEAKKASD---KDDEDEDDDDEEKD 391
            |||||||.|.|...:... |:..|||||:.|:|.:|||.|||.|...|   :|:||||:|:.|:|
Zfish   331 LITDDVEEAEKFGTDTWGATKGPEKKMKDQQEEEERKKREEEEKSKKDDNEEDEEDEDEDEPEED 395

  Fly   392 DESKQDKDQSEHDE 405
            |.:::..::.|..|
Zfish   396 DHTEEPPEEEEEGE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_524293.2 Calreticulin 25..332 CDD:459737 219/307 (71%)
calr3aNP_571122.2 Calreticulin 23..332 CDD:459737 220/309 (71%)

Return to query results.
Submit another query.