DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and cnx1

DIOPT Version :10

Sequence 1:NP_524293.2 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001342872.1 Gene:cnx1 / 2543041 PomBaseID:SPAC3C7.11C Length:560 Species:Schizosaccharomyces pombe


Alignment Length:429 Identity:147/429 - (34%)
Similarity:201/429 - (46%) Gaps:88/429 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKENFDNENWEDTWIYSKHPGKEF----------GKFVLT----PGTFYNDAEADKGIQTSQDAR 73
            |.|.|... |.:.||.|.  .|.|          |::.:.    ||....:|    |:....:|.
pombe    42 LVEQFQGA-WSERWIPSH--AKRFVNGIEEMSYVGEWTVEESSGPGALKGEA----GLVMKDEAA 99

  Fly    74 FYAASRKFDGFSNE-DKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGES----PYEIMFG 133
            .:|.|.:||...|| :|.||||:.|..|:.::|||.|:||.     ....|||.    .|.||||
pombe   100 HHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-----AEPTHGEMSNSIDYRIMFG 159

  Fly   134 PDICGPGTKKVHVIFSYK-------GKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKV 191
            ||.||. ..:||.||.:|       .:.||.|:.........|:.|||||:||.|:||.|:.:.|
pombe   160 PDKCGV-NDRVHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVV 223

  Fly   192 ESGNLEDDWDFLAP---------------------KKIKDPTATKPEDWDDRA--TIPDPDDKKP 233
            ..|:|  .:||:.|                     .:|.||.|.||:|||:.|  .|||||..||
pombe   224 RQGSL--FYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIPDPDAVKP 286

  Fly   234 EDW--DKPEHIPDPDATKPEDWDDEMD-------------------GEWEPPMIDNPEFKGEWQP 277
            |||  |:|.:||||:|.||||||||.|                   |||:||||.||.::|.|.|
pombe   287 EDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKPPMIRNPNYRGPWSP 351

  Fly   278 KQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKA 342
            ..:.||.:.|.|...:|.||:|..||.......:..:||:||.::....|.|:.:...:|.|.:.
pombe   352 PMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNIRFSNIYVGHSIEDAERL 416

  Fly   343 AAEV---KNTQAGEKKMKEAQDEVQRKKDEEEAKKASDK 378
            ..|.   |.....|...|:...|.|....:||:.:..:|
pombe   417 GNETFLPKLKAERELLSKQESMEKQSMHVDEESNQILEK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_524293.2 Calreticulin 25..332 CDD:459737 135/376 (36%)
cnx1NP_001342872.1 Calreticulin 42..406 CDD:459737 136/378 (36%)

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