DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and cnx1

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001342872.1 Gene:cnx1 / 2543041 PomBaseID:SPAC3C7.11c Length:560 Species:Schizosaccharomyces pombe


Alignment Length:429 Identity:147/429 - (34%)
Similarity:201/429 - (46%) Gaps:88/429 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKENFDNENWEDTWIYSKHPGKEF----------GKFVLT----PGTFYNDAEADKGIQTSQDAR 73
            |.|.|... |.:.||.|.  .|.|          |::.:.    ||....:|    |:....:|.
pombe    42 LVEQFQGA-WSERWIPSH--AKRFVNGIEEMSYVGEWTVEESSGPGALKGEA----GLVMKDEAA 99

  Fly    74 FYAASRKFDGFSNE-DKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGES----PYEIMFG 133
            .:|.|.:||...|| :|.||||:.|..|:.::|||.|:||.     ....|||.    .|.||||
pombe   100 HHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-----AEPTHGEMSNSIDYRIMFG 159

  Fly   134 PDICGPGTKKVHVIFSYK-------GKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKV 191
            ||.||. ..:||.||.:|       .:.||.|:.........|:.|||||:||.|:||.|:.:.|
pombe   160 PDKCGV-NDRVHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTLIVKPDQTFEVRINGDVV 223

  Fly   192 ESGNLEDDWDFLAP---------------------KKIKDPTATKPEDWDDRA--TIPDPDDKKP 233
            ..|:|  .:||:.|                     .:|.||.|.||:|||:.|  .|||||..||
pombe   224 RQGSL--FYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIPDPDAVKP 286

  Fly   234 EDW--DKPEHIPDPDATKPEDWDDEMD-------------------GEWEPPMIDNPEFKGEWQP 277
            |||  |:|.:||||:|.||||||||.|                   |||:||||.||.::|.|.|
pombe   287 EDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKPPMIRNPNYRGPWSP 351

  Fly   278 KQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKA 342
            ..:.||.:.|.|...:|.||:|..||.......:..:||:||.::....|.|:.:...:|.|.:.
pombe   352 PMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNIRFSNIYVGHSIEDAERL 416

  Fly   343 AAEV---KNTQAGEKKMKEAQDEVQRKKDEEEAKKASDK 378
            ..|.   |.....|...|:...|.|....:||:.:..:|
pombe   417 GNETFLPKLKAERELLSKQESMEKQSMHVDEESNQILEK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 135/376 (36%)
cnx1NP_001342872.1 Calreticulin 42..406 CDD:306718 136/378 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53836
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R163
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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