DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and SPOM_SPBP4H10.19C

DIOPT Version :10

Sequence 1:NP_524293.2 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_596193.1 Gene:SPOM_SPBP4H10.19C / 2541360 PomBaseID:SPBP4H10.19C Length:381 Species:Schizosaccharomyces pombe


Alignment Length:203 Identity:51/203 - (25%)
Similarity:83/203 - (40%) Gaps:19/203 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TVGFISAEVYLKENFDNENWEDTWIYSKHP-GKEFG--KFVLTPGTFYNDAEADKGIQTSQDARF 74
            |:..:.:|.:..|  |...|...|   :.| .|:.|  ..|..||:...|   :.|:.|.:..:.
pombe    28 TIPSVFSEQFTSE--DITTWRSRW---RAPVNKDLGVWDLVEAPGSHLRD---EYGLITLKSNKP 84

  Fly    75 YAASRKFDGFSNEDK---PLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPDI 136
            :......:..:....   |:|:.|.||..:...||..||.|...| :..::..|.|..|.||...
pombe    85 HILISNLENPTTRQSSSVPIVLSFQVKPTKPWTCGHAYVSLVHQS-NPKNVSKEPPSVIRFGVKK 148

  Fly   137 CGPGTKKVHVIFSYKGK--NHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDD 199
            ||........|.||.||  .||.........:..|..|||::: :.|..:..|...|.:|::..:
pombe   149 CGMFDYISLSIISYDGKVSCHLYDAPPSGLVEGRTSMYTLLLQ-NTTVVIRRDQSVVYTGDVGTN 212

  Fly   200 WDFLAPKK 207
            : |.:|.|
pombe   213 F-FHSPTK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_524293.2 Calreticulin 25..332 CDD:459737 49/191 (26%)
SPOM_SPBP4H10.19CNP_596193.1 Calreticulin 33..>213 CDD:459737 47/189 (25%)

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