DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and crt-1

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_504575.1 Gene:crt-1 / 178997 WormBaseID:WBGene00000802 Length:395 Species:Caenorhabditis elegans


Alignment Length:401 Identity:241/401 - (60%)
Similarity:293/401 - (73%) Gaps:11/401 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVLLATVGFISAEVYLKENFDNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDA 72
            :.|||.|..:|||||.||.|::.:||..|:.|||. .:||.|.|:.|.|::....|:||||||||
 Worm     4 LCLLAIVAVVSAEVYFKEEFNDASWEKRWVQSKHK-DDFGAFKLSAGKFFDVESRDQGIQTSQDA 67

  Fly    73 RFYAASRKFD-GFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPDI 136
            :||:.:.||| .|||:.|.||:|::|||||.|||||||||:.....|..|.|||:||.:||||||
 Worm    68 KFYSRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDI 132

  Fly   137 CGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWD 201
            ||| |::||||.:|||:|.||.|:|.||.|..||.||||:..||||||.||.|..::|:||:|||
 Worm   133 CGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWD 196

  Fly   202 FLAPKKIKDPTATKPEDWDDRATIPDPDDKKPEDWDKPEHIPDPDATKPEDWDDEMDGEWEPPMI 266
            .|..||||||.|.||||||:|..|.|.:|.|||||:||||||||||.||||||||||||||||||
 Worm   197 LLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMI 261

  Fly   267 DNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVL 331
            ||||:||||:|||:.||.|||.|.||||.||||.|||:||..:....:|||||||||||||||::
 Worm   262 DNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNII 326

  Fly   332 ITDDVELAAKAAAEV-KNTQAGEKKMKEAQDEVQRKKDEEEAKKASDKDDEDEDDDDEEKDDESK 395
            |||.||.|...|||. ...:..||:.||..||..||.:||..|||.::.:..:|||:|||::|  
 Worm   327 ITDSVEEAEAHAAETFDKLKTVEKEKKEKADEETRKAEEEARKKAEEEKEAKKDDDEEEKEEE-- 389

  Fly   396 QDKDQSEHDEL 406
                 ..||||
 Worm   390 -----EGHDEL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 198/307 (64%)
crt-1NP_504575.1 Calreticulin 19..327 CDD:278680 199/309 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 314 1.000 Domainoid score I700
eggNOG 1 0.900 - - E1_KOG0674
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37911
Inparanoid 1 1.050 507 1.000 Inparanoid score I727
Isobase 1 0.950 - 0 Normalized mean entropy S1196
OMA 1 1.010 - - QHG53836
OrthoDB 1 1.010 - - D351852at33208
OrthoFinder 1 1.000 - - FOG0002317
OrthoInspector 1 1.000 - - oto17640
orthoMCL 1 0.900 - - OOG6_102266
Panther 1 1.100 - - LDO PTHR11073
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R163
SonicParanoid 1 1.000 - - X1529
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.860

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