DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Calr and Calr4

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_017175400.2 Gene:Calr4 / 108802 MGIID:2140435 Length:505 Species:Mus musculus


Alignment Length:407 Identity:214/407 - (52%)
Similarity:274/407 - (67%) Gaps:37/407 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDARFYAASRKFDGFSNEDKPLVVQFS 96
            |...|:.|||. .::|:|.|..|.||.|.|.|||:||::||:|||.|.:|..||||::.||||||
Mouse   104 WTKRWVQSKHQ-SDYGQFQLASGKFYQDKERDKGLQTTEDAKFYALSTRFKPFSNENETLVVQFS 167

  Fly    97 VKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGKNHLISKDI 161
            |||||.|||||||||||..:|:|.|||.||.|.|||||||||.|..::.||.|:|||.|..:|.:
Mouse   168 VKHEQGIDCGGGYVKLFPAALNQEDMHSESQYYIMFGPDICGFGNNRLQVILSHKGKYHENNKTL 232

  Fly   162 RCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPTATKPEDWDDRATIP 226
            :|:.:..||.||||:||:.||||.|||:||.||.||||||||.|||||||.|.||..||:|..|.
Mouse   233 KCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLEDDWDFLPPKKIKDPYARKPRKWDERQQIE 297

  Fly   227 DPDDKKPEDWDKPEHIPDPDATKPEDWDDEMDGEWEPPMIDNPEFKGEWQPKQLDNPNYKGAWEH 291
            ||||||||||:..|.||||||.||:||::.|||.||.|:|.|.::.|||:|:.:|||||:|.|.|
Mouse   298 DPDDKKPEDWEDSEFIPDPDAKKPDDWNEAMDGVWEGPLIPNVKYMGEWKPRIIDNPNYQGEWIH 362

  Fly   292 PEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEVKNTQAG---- 352
            |||.||:|.||..:.....|..||.||||||||:||||.|:|:|.|.    |.||.|...|    
Mouse   363 PEIDNPKYRPDPTIGHYHNISVLGLDLWQVKSGSIFDNFLLTNDEEF----AEEVGNMTWGLRKD 423

  Fly   353 -EKKMKEAQDEVQRKKDEEEAKKASDKD----------DEDEDDDDEEKDDESKQDK-------- 398
             |::.:|..:|::::|:.||.||..:|:          ||::::|.||.|:|..:::        
Mouse   424 VEQQWRELYEEMEKQKEAEETKKKREKERARQEDVWGLDEEDEEDAEEDDEEEAEERLKQEGSAA 488

  Fly   399 ----DQSE-----HDEL 406
                ||.|     .|||
Mouse   489 RASLDQKEAHLDQKDEL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 183/299 (61%)
Calr4XP_017175400.2 Calreticulin 103..403 CDD:395201 183/299 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0674
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53836
OrthoDB 1 1.010 - - D351852at33208
OrthoFinder 1 1.000 - - FOG0002317
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1529
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.890

Return to query results.
Submit another query.