DRSC/TRiP Functional Genomics Resources

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Protein Alignment Calr and si:ch211-274f20.2

DIOPT Version :9

Sequence 1:NP_001262430.1 Gene:Calr / 41166 FlyBaseID:FBgn0005585 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_001344439.4 Gene:si:ch211-274f20.2 / 100005358 ZFINID:ZDB-GENE-091204-91 Length:452 Species:Danio rerio


Alignment Length:458 Identity:109/458 - (23%)
Similarity:170/458 - (37%) Gaps:133/458 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ISAEVYLKENFDNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEA-----------DKGIQTSQ 70
            |..:.|..|.||....:..|:.||...|...         ||...|           :||:....
Zfish    34 IPDQAYFAETFDEGALDRKWVLSKAVVKHLR---------YNGEWAVEESIQPRLLGNKGLVLKS 89

  Fly    71 DARFYAAS---RKFDGFSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTD------MHGES 126
            ..|.:|.|   |....|  :||||::|:.|..::.|||||.|:||    |.|:|      ....:
Zfish    90 PGRHHAISAYLRNIYHF--KDKPLILQYEVSFQKGIDCGGAYIKL----LSQSDDLRLSQFSDAT 148

  Fly   127 PYEIMFGPDICGPGTKKVHVIFSYKG-------KNHLISKDIRCKD---DVYTHFYTLIVRPDNT 181
            ||.||||||.|. ...|:|.|||:..       :.|....::...|   |...|.|||.:.||||
Zfish   149 PYTIMFGPDKCS-SNHKIHFIFSHHNPITRTYEEKHARQPEMDLSDYFTDQQAHLYTLNLYPDNT 212

  Fly   182 YEVLIDNEKVESGNLEDDWDFLAPKKIKDPTATKPEDWDDRATIPDPDDKKPE-------DWDKP 239
            :|:|:|...:..|:|.:|.|        .|.|:              .|:|.|       |.:..
Zfish   213 FEILVDLTLINKGSLLEDMD--------TPVAS--------------SDQKQEHLTNEASDLNLE 255

  Fly   240 EHIPDPDATKPEDWDDEMDGEWEPPMID---NPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVP 301
            :|:      :.:..|.:.:...|..:.:   .|...|...||...:.|          .|.:...
Zfish   256 QHM------RSDGVDRQRNDCTEASVCEGSSRPASSGSNNPKNQPSTN----------TNDKDNK 304

  Fly   302 DDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEV---KNTQAGEKKMKEA---- 359
            ..:.:....|..:||:||.:....:|||:|:.||:|:|.:...:.   :.|....:|:..|    
Zfish   305 GKQQFTMSPIAAVGFELWSLTGDVMFDNILLCDDLEVARRWTEDTWGQRQTPGMIEKLLMATVKR 369

  Fly   360 --------------------------------QDEVQRKKDEEEAKKASDKDDEDEDDDDEEKDD 392
                                            ||...:|.||.:.....|.::....|..|.:..
Zfish   370 PWLWGVYVFTVGLPIILFVSLMWPDKRFGPPDQDYYYKKTDEPQTDGPQDVEEHVTHDHGENQRV 434

  Fly   393 ESK 395
            |:|
Zfish   435 ETK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalrNP_001262430.1 Calreticulin 25..332 CDD:278680 89/346 (26%)
si:ch211-274f20.2XP_001344439.4 Calreticulin 40..335 CDD:306718 89/348 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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