DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8319 and Sry-beta

DIOPT Version :10

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:410 Identity:86/410 - (20%)
Similarity:141/410 - (34%) Gaps:139/410 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRICGGASENMLGIFDDQVEEYVDGAKLAEMVKTCADV------------QLDPDDAMPQKMCIS 57
            |.:||  .|..:|:|     :.::|..:....|...|:            :|.|:.|    .|..
  Fly     8 CFVCG--KEKSVGVF-----QLIEGCIVPGTFKPIKDILKYFEKIINQRLELLPNSA----ACRD 61

  Fly    58 CVH-------------------------------DARTAYGFKRRCEENYKKFYLAILNGQVIKD 91
            |:.                               .|.|.....:|.......|  .|:....:|:
  Fly    62 CLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKAETKQQAAKRARVQVPAF--KIVQATALKE 124

  Fly    92 ---EPNEED--------------FLFIENPDKGNLEAKKKLNKEIKKTHQTASRTTKSSITTSRA 139
               :|.|||              |.|.| ||.....::::...|          ||:        
  Fly   125 PERQPGEEDECEEFMKEEMLDEEFQFSE-PDDSMPSSEEEFFTE----------TTE-------- 170

  Fly   140 GRQLRSIKNQTFKCELCIKQFKRQINLLDHMKVHSNSHVCQNCEERFLFKADLDNHQCYRNSNST 204
                       ..|.:|.:.|..|..|..|:|    :..||..|:                    
  Fly   171 -----------IPCHICGEMFSSQEVLERHIK----ADTCQKSEQ-------------------- 200

  Fly   205 VECPEC-LKVFSSTQSLDSHKCKDMQE-RSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGPHK 267
            ..|..| ||| ...:.||.|  .::.| ::..:|.:|.:.|:.::|:..|:.:|.:.|:    ::
  Fly   201 ATCNVCGLKV-KDDEVLDLH--MNLHEGKTELECRYCDKKFSHKRNVLRHMEVHWDKKK----YQ 258

  Fly   268 CSYCQTGFFNKSALKVHIHAH-MGERPHACPFCVSNFRSKQALKVHIRIHTGEKP-YQCPHCPKT 330
            |..|...|.....:..|:..| ..|....|..|...|::|:..|.|:|.|..::| |.||.|.|:
  Fly   259 CDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQFKTKRTYKHHLRTHQTDRPRYPCPDCEKS 323

  Fly   331 FSDNNNLAKHRRRHSD-ERP 349
            |.|...|..|:|.|.. |:|
  Fly   324 FVDKYTLKVHKRVHQPVEKP 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:462262 17/116 (15%)
COG5048 <153..368 CDD:227381 54/202 (27%)
C2H2 Zn finger 153..173 CDD:275368 7/19 (37%)
C2H2 Zn finger 179..196 CDD:275368 3/16 (19%)
C2H2 Zn finger 207..227 CDD:275370 8/20 (40%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
C2H2 Zn finger 268..288 CDD:275368 4/19 (21%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 9/19 (47%)
C2H2 Zn finger 352..368 CDD:275368
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 8/22 (36%)
C2H2 Zn finger 231..251 CDD:275368 5/19 (26%)
C2H2 Zn finger 259..308 CDD:275368 13/48 (27%)
C2H2 Zn finger 288..303 CDD:275370 4/14 (29%)
zf-C2H2 315..337 CDD:395048 10/21 (48%)
C2H2 Zn finger 317..337 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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