DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8319 and gl

DIOPT Version :10

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001262708.1 Gene:gl / 42210 FlyBaseID:FBgn0004618 Length:679 Species:Drosophila melanogaster


Alignment Length:153 Identity:56/153 - (36%)
Similarity:81/153 - (52%) Gaps:4/153 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 STQSLDSHKCKDMQERSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSA 280
            |.:.||..:.....|..|..|..|.:.:.|...||.||..|:    |..|::|..|...|...:.
  Fly   419 SNEDLDGDEGSSGGEMKPNLCRLCGKTYARPSTLKTHLRTHS----GERPYRCPDCNKSFSQAAN 479

  Fly   281 LKVHIHAHMGERPHACPFCVSNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHS 345
            |..|:..|.|::|..||.|...|....::..|:|.|:||:||:|..|.|:|||::.|.||.|.||
  Fly   480 LTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSFSDSSTLTKHLRIHS 544

  Fly   346 DERPYKCSICLQDFREKHHLKRH 368
            .|:||:|.:||..|.:..:|.||
  Fly   545 GEKPYQCKLCLLRFSQSGNLNRH 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:462262
COG5048 <153..368 CDD:227381 54/151 (36%)
C2H2 Zn finger 153..173 CDD:275368
C2H2 Zn finger 179..196 CDD:275368
C2H2 Zn finger 207..227 CDD:275370 3/10 (30%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 6/19 (32%)
C2H2 Zn finger 324..344 CDD:275368 10/19 (53%)
C2H2 Zn finger 352..368 CDD:275368 5/15 (33%)
glNP_001262708.1 COG5048 <426..571 CDD:227381 53/146 (36%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 5/19 (26%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
C2H2 Zn finger 523..543 CDD:275368 10/19 (53%)
C2H2 Zn finger 551..571 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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