DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8319 and su(Hw)

DIOPT Version :10

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:405 Identity:114/405 - (28%)
Similarity:164/405 - (40%) Gaps:77/405 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QVEEYVDGAKLAEMVK--TCADVQLDPDDAMPQKMCISCVHDARTAYGFKRRCEENYKKFYLAIL 84
            ::|.||..|..:|..|  |...|..:.||.:.    .....|.....|   |.|.|         
  Fly   130 KMEHYVLQAVKSENTKADTTVTVVTEEDDTID----FILADDEEVVPG---RIENN--------- 178

  Fly    85 NGQVIKDEPNEEDFLFIENPDKGNLEAKKKLN------KEI-----KKTHQTASR--TTKSSITT 136
            |||.|....::||  ..|:.|:...::..|.|      |||     .|.::|..|  :.|..:..
  Fly   179 NGQEIVVTEDDED--LGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEF 241

  Fly   137 SR--AGRQLRS---IKN------------------------QTF-----KCELCIKQFKRQINLL 167
            .|  :|..||.   :||                        .||     .|..|.|.||.|.:..
  Fly   242 CRYDSGYHLRKADMLKNLEKIEKDAVVMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYE 306

  Fly   168 DHMKV-HS--NSHVCQNCEERFLFKADLDNH-QCYRNSNSTVECPECLKVFSSTQSLDSHK---- 224
            .|:.: ||  :...|..|......:|.|..| :.:::......|..|.|.|:.:..|..|:    
  Fly   307 RHIFITHSEFSDFPCSICNANLRSEALLALHEEQHKSRGKPYACKICGKDFTRSYHLKRHQKYSS 371

  Fly   225 CKDMQERSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGP-HKCSYCQTGFFNKSALKVHIHAH 288
            |.. .|.....|..|.:.|.|..||::||..|..::....| :.|..|:..|::.|.|.:||..|
  Fly   372 CSS-NETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTH 435

  Fly   289 MGERPHACPFCVSNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPYKCS 353
            .||:|..|..|...|.:..|||.|.|.|||||||.|..|.:.|:....|.:|.:||:.|||:||.
  Fly   436 TGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCD 500

  Fly   354 ICLQDFREKHHLKRH 368
            .|.:.|.:...|:.|
  Fly   501 ECGKSFIQATQLRTH 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:462262 15/58 (26%)
COG5048 <153..368 CDD:227381 73/223 (33%)
C2H2 Zn finger 153..173 CDD:275368 7/20 (35%)
C2H2 Zn finger 179..196 CDD:275368 5/17 (29%)
C2H2 Zn finger 207..227 CDD:275370 7/23 (30%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..368 CDD:275368 4/15 (27%)
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 7/20 (35%)
COG5048 <312..517 CDD:227381 67/205 (33%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
COG5048 <467..620 CDD:227381 19/49 (39%)
C2H2 Zn finger 471..491 CDD:275368 5/19 (26%)
C2H2 Zn finger 499..519 CDD:275368 5/17 (29%)
C2H2 Zn finger 525..545 CDD:275368
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.