DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8319 and Meics

DIOPT Version :10

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:455 Identity:115/455 - (25%)
Similarity:176/455 - (38%) Gaps:108/455 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRICGGASENMLGIFDDQVEEYVDGAKLAEMVKTCADVQLDPD------DAMPQKMCISCVHDAR 63
            ||.|...|..::.:|..::.:    ..:.||:.:     :.|:      |.||||:|.:|:..|:
  Fly    21 CRACAEHSSILVDLFSKEISD----PPIWEMLNS-----ILPEICRVKRDEMPQKICPTCLVAAQ 76

  Fly    64 TAYGFKRRCEENYKKFYLAIL-------------------------------------------- 84
            .|:.|:.:||::: :|:..:|                                            
  Fly    77 NAFHFRHKCEQSF-QFFSQLLQLDKSNSNLSRSHCRRGTMNPLIPFEIVGCEDPLDTNVTKLDAN 140

  Fly    85 -----------------NGQVIKDEPNEEDFLFIENPDKGNLEA------KKKLNKEIKKTHQTA 126
                             |||  :.||.:|.|....|..|...|.      :...::|....:..:
  Fly   141 RPDVKTDIDEPTDGKATNGQ--ESEPLQEVFEITMNDIKTEDEVSIQETFEDAFDEENDNNNTDS 203

  Fly   127 SRTTKSSITTSR------------AGRQLRSIKNQTFKCELCIKQFKRQINLLDHMKVHSNS--- 176
            .|......|...            .|||.....||:..|..|...:..|..|..|:..|...   
  Fly   204 EREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGVSYSTQKALARHVAKHKEQGDT 268

  Fly   177 ---HVCQNCEERFLFKADLDNHQCYRNSNSTVECPECLKVFSSTQSLDSHKCKDMQERSPFQCPH 238
               |:|..|...|...|.|..|:.........:||.|.|.::...:|.||.....:|:. .:||.
  Fly   269 QKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKG-HKCPQ 332

  Fly   239 CQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSALKVHIHAHMGERPHACPFCVSNF 303
            |.:.|....||:||:..|.    |..|:||..|...|...|.||:|...|..|||..|..|...|
  Fly   333 CDKTFYTRGNLRAHIQRHT----GERPYKCPDCPQTFAKNSGLKLHSRLHKEERPFKCELCGKGF 393

  Fly   304 RSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPYKCSICLQDFREKHHLKRH 368
            ...|.|..|:|:|.|::.::||.|.|:|.:.:|:.||:|.||..:|:||..|.|.|...||||.|
  Fly   394 VQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSH 458

  Fly   369  368
              Fly   459  458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:462262 20/79 (25%)
COG5048 <153..368 CDD:227381 74/220 (34%)
C2H2 Zn finger 153..173 CDD:275368 5/19 (26%)
C2H2 Zn finger 179..196 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..227 CDD:275370 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 9/19 (47%)
C2H2 Zn finger 352..368 CDD:275368 8/15 (53%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262 21/83 (25%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 6/19 (32%)
SFP1 <296..374 CDD:227516 26/82 (32%)
COG5048 <299..486 CDD:227381 62/165 (38%)
C2H2 Zn finger 302..322 CDD:275368 7/19 (37%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 7/19 (37%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 28/64 (44%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
C2H2 Zn finger 442..462 CDD:275368 9/17 (53%)
C2H2 Zn finger 470..486 CDD:275368
C2H2 Zn finger 500..520 CDD:275368
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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