DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8319 and pita

DIOPT Version :10

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:479 Identity:102/479 - (21%)
Similarity:167/479 - (34%) Gaps:137/479 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCRICGGASENMLGIFDDQVEEYVDGAKLAEMVKTCADVQLD----------PDDAMPQKMCISC 58
            :||.| ...:.:..||::.           ..|||.|::.|.          ..|.||..:|:.|
  Fly    17 VCRFC-LTEQKLASIFEEN-----------PRVKTTANLPLQIMAITAIEVYAGDGMPGHICLEC 69

  Fly    59 VHDARTAYGFKRRCE---------------------------------------------ENYKK 78
            .......|.||:.|:                                             |..||
  Fly    70 RLLFEHCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKK 134

  Fly    79 ------------------------------------------FYLAILNGQ---------VIKDE 92
                                                      :.|.:.|.|         :::|.
  Fly   135 LLNTMAKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDM 199

  Fly    93 PNEEDFLFIENPDKGNLEAKKKLNK-EIKKTHQTASRTTKSSITTSRAGRQLRSIKNQTFKCELC 156
            .:|.:..|.:.|.|.:....|.||| .|:..::..:...:..:.|.:..|      :.:....:.
  Fly   200 ASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKR------DDSGNVAIV 258

  Fly   157 IKQFKRQINLLDH-------MKVHSNSHVCQNCEERFLFKADLDNHQCYRNSNSTVECPECLKVF 214
            .:.....:.|.|.       .||.::...|.:||..|..:..|:.|:.....:.:.:|..|.|.|
  Fly   259 TEVLDSDLPLDDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSF 323

  Fly   215 SSTQSLDSHKCKDMQERSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKS 279
            .|...|..|......|| ||:|..|.:||||:..|..|...|.:..:    ..|.||:..|.::.
  Fly   324 FSKYDLAKHNFVHTGER-PFKCAICSKAFTRKALLHRHERTHTDVPK----FICVYCEKPFLSRQ 383

  Fly   280 ALKVHIHAHMGERPHACPFCVSNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRH 344
            .::.|...|..:||..|..|..:|..||.|:.|..:|:...|:.|.||.::||..:.||:|...|
  Fly   384 EMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAH 448

  Fly   345 SDERPYKCSICLQDFREKHHLKRH 368
            :.:|.|.|..|.:.:...|||.||
  Fly   449 AGKRAYPCKYCHKSYMLSHHLSRH 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:462262 22/171 (13%)
COG5048 <153..368 CDD:227381 63/221 (29%)
C2H2 Zn finger 153..173 CDD:275368 3/26 (12%)
C2H2 Zn finger 179..196 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..227 CDD:275370 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
C2H2 Zn finger 324..344 CDD:275368 8/19 (42%)
C2H2 Zn finger 352..368 CDD:275368 5/15 (33%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 19/86 (22%)
COG5048 <281..506 CDD:227381 62/197 (31%)
C2H2 Zn finger 288..308 CDD:275368 6/19 (32%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..388 CDD:275370 4/15 (27%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 428..448 CDD:275368 8/19 (42%)
C2H2 Zn finger 456..476 CDD:275368 7/17 (41%)
C2H2 Zn finger 486..506 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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