DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8319 and Zfp40

DIOPT Version :9

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_001344626.1 Gene:Zfp40 / 22700 MGIID:99185 Length:796 Species:Mus musculus


Alignment Length:388 Identity:114/388 - (29%)
Similarity:166/388 - (42%) Gaps:77/388 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PQKMCISC--------------VHDARTAY-------------GFKR-----------RCEENYK 77
            |.| ||.|              :|....:|             |.||           .|::..|
Mouse   280 PYK-CIECGKCYYHSSFEKHYRIHSEEESYKCNDCRKSFICCLGLKRHHKIHGGERPYECKQCSK 343

  Fly    78 KFYLA--ILN---------------GQVIKDEPNEEDFLFIENPDKGNLEA---KKKLNKEIKKT 122
            .||.:  :.|               |:.:......:....|...:|..:.|   |..:.|...||
Mouse   344 SFYTSSHLENHYRTHRRKLHRCNECGKSLSSSSGLQRHQRIHRGEKAYICAECNKCFIQKSQLKT 408

  Fly   123 HQ---TASRTTKSS-------ITTSRAGRQLRSIKNQTFKCELCIKQFKRQINLLDHMKVHSNS- 176
            ||   |..::.|.|       :.:|....|......:.:||..|.|.|.:|.:|..|.|:|:.. 
Mouse   409 HQRIHTGEKSYKCSECEKSFTVGSSLRIHQRIHTGEKPYKCSECHKCFIQQAHLRRHQKIHTGEK 473

  Fly   177 -HVCQNCEERFLFKADLDNHQCYRNSNSTVECPECLKVFSSTQSLDSHKCKDMQERSPFQCPHCQ 240
             :.|..||:.|...:||..||.........:|.:|.|.|.....|..|:.....|: |::|..|:
Mouse   474 PYKCSECEKSFTVGSDLRMHQKIHTGEKPYKCSDCDKCFIQKAKLKKHQRIHTGEK-PYKCSECE 537

  Fly   241 QAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGFFNKSALKVHIHAHMGERPHACPFCVSNFRS 305
            :.||...:|:.|..||.    |..|:|||.|...|..|:.|:.|...|.||:|:.|..|...|..
Mouse   538 KCFTVVSDLRTHQKIHT----GEKPYKCSECDKCFIRKANLRRHHRIHTGEKPYKCSDCGKCFIQ 598

  Fly   306 KQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPYKCSICLQDFREKHHLKRH 368
            |..|:.|.|||||||||:| .|.|:|:..::|.||::.|:.|:|||||.|.:.|..|.||:||
Mouse   599 KANLRTHERIHTGEKPYKC-ECGKSFTVGSDLRKHQKCHTGEKPYKCSECNKCFIRKAHLRRH 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:285071 12/65 (18%)
COG5048 <153..368 CDD:227381 81/216 (38%)
C2H2 Zn finger 153..173 CDD:275368 8/19 (42%)
C2H2 Zn finger 179..196 CDD:275368 6/16 (38%)
C2H2 Zn finger 207..227 CDD:275370 6/19 (32%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-H2C2_2 308..332 CDD:290200 14/23 (61%)
zf-C2H2 322..344 CDD:278523 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..368 CDD:275368 7/15 (47%)
Zfp40NP_001344626.1 KRAB 42..82 CDD:307490
C2H2 Zn finger 227..247 CDD:275368
C2H2 Zn finger 255..275 CDD:275368
COG5048 279..677 CDD:227381 114/388 (29%)
C2H2 Zn finger 283..302 CDD:275368 3/18 (17%)
C2H2 Zn finger 310..330 CDD:275368 3/19 (16%)
C2H2 Zn finger 338..358 CDD:275368 5/19 (26%)
C2H2 Zn finger 365..385 CDD:275368 1/19 (5%)
C2H2 Zn finger 393..413 CDD:275368 7/19 (37%)
C2H2 Zn finger 421..441 CDD:275368 3/19 (16%)
C2H2 Zn finger 449..469 CDD:275368 8/19 (42%)
C2H2 Zn finger 477..497 CDD:275368 8/19 (42%)
C2H2 Zn finger 505..525 CDD:275368 6/19 (32%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
C2H2 Zn finger 561..581 CDD:275368 7/19 (37%)
C2H2 Zn finger 589..609 CDD:275368 7/19 (37%)
C2H2 Zn finger 618..636 CDD:275368 6/17 (35%)
C2H2 Zn finger 644..664 CDD:275368 9/17 (53%)
C2H2 Zn finger 672..692 CDD:275368
zf-H2C2_2 684..709 CDD:316026
C2H2 Zn finger 700..720 CDD:275368
C2H2 Zn finger 728..748 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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