DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8319 and LOC100911196

DIOPT Version :9

Sequence 1:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster
Sequence 2:XP_006228368.1 Gene:LOC100911196 / 100911196 RGDID:6494165 Length:1059 Species:Rattus norvegicus


Alignment Length:232 Identity:72/232 - (31%)
Similarity:105/232 - (45%) Gaps:11/232 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 QTFKCELCIKQFKRQINLLDHMKVH--SNSHVCQNCEERFLFKADLDNHQCYRNSNSTVECPECL 211
            :.|.|..|.:.||..:.|:.|..||  ..:..|..|.:.|....||..|:..........||.|.
  Rat   790 ERFSCATCGQSFKHFLGLVTHKYVHLVRRTLGCGLCGQSFAGAYDLLLHRRSHRQKRGFRCPVCG 854

  Fly   212 KVFSSTQSLDSH-KCKDMQERSPFQCPHCQQAFTREQNLKAHLLIHAESKQGNGPHKCSYCQTGF 275
            |.|.....|..| :|.  .|:.|::|..|.:.|.|...|:.|.::|.    |....||..|...|
  Rat   855 KRFWEAALLMRHQRCH--TEQRPYRCGVCGRGFLRSWYLRQHRVVHT----GERAFKCGVCAKHF 913

  Fly   276 FNKSALKVHIHAHMGERPHACPFCVSNFRSKQALKVHIRIHTGEKPYQCPHCPKTFSDNNNLAKH 340
            ...|:|..|...|...||..|..|...||.:..|..|.|:|.||:.|:|.||.|.|...:::.:|
  Rat   914 AQSSSLAEHRRLHAVARPQRCGACGKTFRYRSNLLEHQRLHLGERAYRCEHCGKGFFYLSSVLRH 978

  Fly   341 RRRHSDERP-YKCSICLQDFREKHHLKRHFLGKHRDG 376
            :|.|...|| .:|..||:.|::..:.::| |..|:.|
  Rat   979 QRAHEPPRPELRCPACLKAFKDPGYFRKH-LAAHQGG 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8319NP_649920.2 zf-AD 4..79 CDD:285071
COG5048 <153..368 CDD:227381 67/218 (31%)
C2H2 Zn finger 153..173 CDD:275368 6/19 (32%)
C2H2 Zn finger 179..196 CDD:275368 5/16 (31%)
C2H2 Zn finger 207..227 CDD:275370 8/20 (40%)
C2H2 Zn finger 236..256 CDD:275368 6/19 (32%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-H2C2_2 308..332 CDD:290200 11/23 (48%)
zf-C2H2 322..344 CDD:278523 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..368 CDD:275368 4/15 (27%)
LOC100911196XP_006228368.1 PHA03378 <163..>349 CDD:223065
C2H2 Zn finger 222..242 CDD:275368
C2H2 Zn finger 250..270 CDD:275368
COG5048 349..>421 CDD:227381
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 380..400 CDD:275368
C2H2 Zn finger 409..429 CDD:275368
C2H2 Zn finger 441..461 CDD:275370
C2H2 Zn finger 548..568 CDD:275368
zf-H2C2_2 561..584 CDD:404364
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 666..686 CDD:275368
C2H2 Zn finger 694..714 CDD:275368
C2H2 Zn finger 794..814 CDD:275368 6/19 (32%)
C2H2 Zn finger 822..842 CDD:275368 6/19 (32%)
C2H2 Zn finger 850..870 CDD:275368 7/19 (37%)
C2H2 Zn finger 878..898 CDD:275368 6/19 (32%)
C2H2 Zn finger 906..926 CDD:275368 6/19 (32%)
C2H2 Zn finger 934..954 CDD:275368 7/19 (37%)
C2H2 Zn finger 962..982 CDD:275368 7/19 (37%)
C2H2 Zn finger 991..1011 CDD:275368 6/20 (30%)
C2H2 Zn finger 1019..1039 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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