DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8312 and Aplip1

DIOPT Version :10

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster


Alignment Length:352 Identity:69/352 - (19%)
Similarity:121/352 - (34%) Gaps:98/352 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 LPQEETKTMAAAGSSANDGSDSDDFEKLLKFDTTLSNELLPYFDMQLHKNSSQSMVSLSELKEEE 575
            :|.::.:. :.:..|..||||.:|...|:..:.                       .:.:::::|
  Fly    40 IPNDDLED-SHSSKSDGDGSDQEDGIGLVDHEP-----------------------KMRQVEDDE 80

  Fly   576 -GEPLSLLPTINSDPSADPEADYNAEDHDVTAPRRSGVCSDGEEDFLDDADDHYFRHAAMLTMLH 639
             |:.|.:  |::||.|.|....:|:..|.   |...   .|....||.........::|.:|:..
  Fly    81 LGDGLKV--TLSSDGSLDTNDSFNSHRHH---PLNH---QDAIGGFLGMDTSGLGGNSAPVTIGA 137

  Fly   640 RSSMRKMRAADQTSLKYRHQTQSSISSNASSS-----------TTASTSAAAGGG-------SAQ 686
            .:.:    .|..|:...|.:....|..|..||           :.|......|||       |.|
  Fly   138 STDL----LAPNTAATRRRRKLPEIPKNKKSSILHLLGGSNFGSLADEFRNGGGGGIPPAVRSGQ 198

  Fly   687 QGL-------------TSPDSDE----GSISSGCETASTVTNANHEEYNSKRVSDPGQLEQSP-- 732
            |..             :||||:.    |.:.||   .||..:.|..:..|.:::.|  :.|||  
  Fly   199 QRSFLSLKCGYLMDEDSSPDSERMQSLGDVDSG---HSTAHSPNDFKSMSPQITSP--VSQSPFP 258

  Fly   733 ---------DLELEQAQVLEQMMIYQRLEQQLRKNSGDATNYSSSS------SITLKRSNSGSDK 782
                     .||:.:|..........|...::....|||......:      .:.|:....|...
  Fly   259 PPFGGVPFGQLEMLEATHRGLHKFVPRHHDEIELEIGDAIYVQKEAEDLWCEGVNLRTGRQGIFP 323

  Fly   783 QERSDHPDDDNSDSDESGYVEFQEKER 809
            ...:  .|.|.::.|.:  |:..:|||
  Fly   324 SAYA--VDLDYNEFDPT--VQLVKKER 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:405418
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735 6/55 (11%)
PTB_JIP 343..490 CDD:269923 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

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