DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8312 and ced-6

DIOPT Version :9

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster


Alignment Length:690 Identity:122/690 - (17%)
Similarity:205/690 - (29%) Gaps:248/690 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 TPATTAAPLPPVPIGTPPRQHKFVKSNSLARL-LGNTYNAKKFEKQEQKRLASGSEGGKFNTYSG 168
            |..||..|..|...|......|  .:..:|:| ..|..|:.|  :|:|.:....::||. ||..|
  Fly    11 TAPTTTMPYQPANSGGTSGGSK--AAAKMAQLKFWNKQNSSK--QQQQDKDKDAADGGN-NTSGG 70

  Fly   169 RRGRAGPYLERFKRVSKEDGDVAGEDDTVRVTNVITLTTDSRDLLYGSRQEHVGRTGGYDQNDQL 233
            ..|            |..:||...|...                         |:.......:||
  Fly    71 GTG------------SNSNGDAKSEAKN-------------------------GKRNWLHTPEQL 98

  Fly   234 TSKAYRTLTRSLGKLWRRTHSVDISTPDPEFKVSYLGNVLTGWAKAGEGCVEKQLNTLWRNYTQH 298
            .|                .|:|        :.|.:.||:.....| |...|::.:..|  .:.|.
  Fly    99 IS----------------GHAV--------YLVKFFGNLSVDQPK-GIEVVKEAIRKL--QFAQQ 136

  Fly   299 SK------PDVIMRLKVCASGLKATTRQHGLTEYWAHR-----ITYCCAPKNYPRVFCWIYR--- 349
            .|      .:...:|::..| :|....|...|....|:     |:||...|...:.|.:|.:   
  Fly   137 MKKAETGTQEKFKKLEITIS-IKGVAIQEPRTHKILHQFPLYNISYCADEKGVKKFFSFIAKTVK 200

  Fly   350 -HEG----------------RKLKHELRCHAVLCSKEKIAQDICDTLRENLESALREF------- 390
             .:|                .|::....|...:  ..|:|.||..|:.:..:.|.|::       
  Fly   201 TQDGSDPTSNGHANGNGDGSAKVEESHECFVFI--SNKLASDITLTIGQAFDLAYRKYMDSTEKT 263

  Fly   391 KREKILKQNARLSLANAVYD------NPSLPRRKIMLSVGGNNYRPPLERSKSAPK--LMAIEEA 447
            ...|..:|...|.....||.      :..||:.::...:.....:..||...:.|:  :....||
  Fly   264 NLSKAQQQINHLQQTVNVYKERLREVSAKLPKAELDALLFNLGIKDILEAPTTEPQNGIEVASEA 328

  Fly   448 IGEEEGDE---IEDTNEPEMMPCCQKDSLYPAMTLGRRRCRRGHSIRRTGKIQSFSPCCSSHMAK 509
            :...:.|:   :.|||.                              .|....|.||  ||.:..
  Fly   329 LSNGKLDDDKLLIDTNS------------------------------TTASTHSASP--SSFLPI 361

  Fly   510 ELPQEETKTMAAAGSSANDGSDSDDFEKLLKFDTTLSNELLPYFDMQLHKNSSQSMVSLSELKEE 574
            ..|:....:..:.|..:|.          .|.|..|.|.                          
  Fly   362 VPPRNNLSSQISIGGKSNS----------QKMDELLLNS-------------------------- 390

  Fly   575 EGEPLSLLPTINSDPSADPEADYNAEDHDVTAPRRSGVC---------SDGEEDFLDDADDHYFR 630
                       :||...||.||   |..::....||.:.         |.|:..|.::.|     
  Fly   391 -----------DSDSDFDPRAD---ETQEIGGTGRSAISNMFGFEPANSFGQHLFSNNND----- 436

  Fly   631 HAAMLTMLHRSSMRKMRAADQTSLKYRHQTQSSISSNASSSTTASTSAAAGGGSAQQGLTSPDSD 695
                                       |:.|::.||...:|...|.:::  |.|::..:|.|...
  Fly   437 ---------------------------HKLQNNNSSLLITSNNNSINSS--GFSSELNITPPLLA 472

  Fly   696 EGSISSGCETASTVTNANHEEYNSKRV-SDPGQLEQSPDL 734
            .....:.....::||..|....|:... |||.:|...|::
  Fly   473 PPPKIAAPRRLNSVTTGNGLNGNTDLFGSDPFELNNGPNI 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:373244 41/224 (18%)
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 36/198 (18%)
AceK 233..>304 CDD:295079 14/72 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438629
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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