DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8312 and Numb

DIOPT Version :10

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_063117648.1 Gene:Numb / 29419 RGDID:620107 Length:659 Species:Rattus norvegicus


Alignment Length:568 Identity:107/568 - (18%)
Similarity:173/568 - (30%) Gaps:208/568 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 WRRTHSVDISTPDPEFKVSYLGNVLTGWAKAGEGCVEKQLNTLWRNYTQHSKPDVIMRLK----- 308
            | :|....:.|....|.|.|||:|....::.                 .|...|.:.|||     
  Rat    32 W-QTDEEGVRTGKCSFPVKYLGHVEVDESRG-----------------MHICEDAVKRLKAERKF 78

  Fly   309 ------------------VCASGLKATTRQHG--LTEYWAHRITYCCAPKNYPRVFCWIYR---- 349
                              |.|.||:....:..  :.:....::::|...:|:.|.|.:|.|    
  Rat    79 FKGFFGKTGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTT 143

  Fly   350 ------------HEGRKLKHELRCHAVLCSKEKIAQD----ICDTL--------RE---NLESAL 387
                        ..|.:|.|.:.|....|.:.|..::    :..|.        ||   .:.:|.
  Rat   144 RRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTAT 208

  Fly   388 REFKREKILK--QNARLSLANAVYDNPSLPRRKIMLSVGGNNYRPPLERSKSAPKLMAIEEAIGE 450
            .:.:||:|:|  |:|:    .|..|....|      ||...|..|    |.|:|....::.....
  Rat   209 EQAEREEIMKQLQDAK----KAETDKTVGP------SVAPGNSAP----SPSSPTSPTLDPTASL 259

  Fly   451 EEGDEIEDTNEPEMMPCCQKDSLYPAMTLGRRRCRRGHSIRRTGKIQSFSPCCSSHMAKELPQEE 515
            |       .|.|..:|               ||......:.|.|..:.| |..|           
  Rat   260 E-------MNNPHAIP---------------RRHAPIEQLARQGSFRGF-PALS----------- 290

  Fly   516 TKTMAAAGSSANDGSDSDDFEKLLKFDTTLS---NELLPYFDMQLHKNSSQSMVSLSELKEEEGE 577
                                :|:..|...||   |||                .|..:.|.:   
  Rat   291 --------------------QKMSPFKRQLSLRINEL----------------PSTMQRKTD--- 316

  Fly   578 PLSLLPTINSDPSADPEADYNAEDHDVTAPRRSGVCSDGEEDFLDDADDHYFRHAAM---LTMLH 639
                .|..|:.|..:.||:           ..|.:||.....|....:|. |..|.|   :|:: 
  Rat   317 ----FPIKNTVPEVEGEAE-----------SISSLCSQITSAFSTPCEDP-FSSAPMTKPVTLV- 364

  Fly   640 RSSMRKMRAADQTSLKYRHQTQSSIS-SNASSSTTASTSAAAGGGSAQQGLTSPDS---DEGSIS 700
                     |.|:.:...:.|.|::. ..|..::||....|...........:||:   :..:|.
  Rat   365 ---------APQSPVLQANGTDSALHVLTAKPASTALAPVAMPVRETNPWAHAPDAANKEIAAIH 420

  Fly   701 SGCETAST-------VTNANHEEYNSKRVSDPGQLEQSPDLELEQAQV 741
            ||.|...:       :..|.|....|:  :|....|.|..:..:|.||
  Rat   421 SGTEWGQSSGAASPGLFQAGHRRTPSE--ADRWLEEVSKSVRAQQPQV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:405418 47/236 (20%)
NumbXP_063117648.1 None

Return to query results.
Submit another query.