DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8312 and Numbl

DIOPT Version :10

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_006228627.1 Gene:Numbl / 292732 RGDID:1307579 Length:641 Species:Rattus norvegicus


Alignment Length:528 Identity:101/528 - (19%)
Similarity:164/528 - (31%) Gaps:185/528 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 FKVSYLGNVLTGWAKAGEGCVE--KQLNTLWRNYTQHSKPDVIMRLKVCASGLKAT--TRQHGLT 324
            |.|.|||:|....::....|.:  |:|..:.|.       .|...|.|.|.||:..  ..:..|.
  Rat   107 FPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRK-------SVKSVLWVSADGLRVVDDKTKDLLV 164

  Fly   325 EYWAHRITYCCAPKNYPRVFCWIYR----------------HEGRKLKHELRCHAVLCSKEKIAQ 373
            :....::::|...:|..:.|.:|.|                ..|.:|.|.:.|....|       
  Rat   165 DQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCAFAAC------- 222

  Fly   374 DICDTLRENLESALREFKREKILKQNARLSLANAVYDNPSLPRRKIMLSVGGNNYRPPLERSKSA 438
                     ||   |:.:|||.....|....:...:....    ...||.||.    |.||    
  Rat   223 ---------LE---RKQRREKECGVTAAFDASRTSFAREG----SFRLSGGGR----PAER---- 263

  Fly   439 PKLMAIEEAIGEEEGD--EIEDTNEPEMMPCCQKDSLYPAMTLGRRRCRRGHSIRRTGKIQSFSP 501
                        |.||  :.|....|.:.|       .||        :.||        .|.:|
  Rat   264 ------------EAGDKKKAEAAAAPAVAP-------GPA--------QPGH--------VSPTP 293

  Fly   502 CCSSHMAKELPQE--ETKTMAAAGSSANDGSDSDDFEKLLKFDTTLSNELLPYFDMQLHKNSSQS 564
            ..:|      |.|  |..|..|||::|                ..:.....| .:..:.:.|.:.
  Rat   294 ATTS------PGEKGEAGTPVAAGTTA----------------AAIPRRHAP-LEQLVRQGSFRG 335

  Fly   565 MVSLSELKEEEGEPLSLLPTINSDPSADPEADYNAEDHDVTAPRRS-----GVCSDGEEDFLDDA 624
            ..:||:........|||  .:|..||              |..||:     |...:.|.....|:
  Rat   336 FPALSQKNSPFKRQLSL--RLNELPS--------------TLQRRTDFQVKGTVPEMEPPGTGDS 384

  Fly   625 DDHYFRHAAMLTMLHRSSMRKMRAADQTSLKYRHQTQSSISSNASSSTTASTSAAAGGGSAQQGL 689
            |.                                  .|::.:..|||..::.:...|..||..|.
  Rat   385 DG----------------------------------ISALCTQISSSFASAGAPVPGPPSATTGT 415

  Fly   690 TSPDSDEGSISSGCETASTVTNANHEEYNSKR---VSDPGQLEQSPDLELEQAQVLEQMMIYQRL 751
            ::  ..|.|:     .|:|.....|:...|:.   :.:..|:.::...:.:|.|..:|....|:.
  Rat   416 SA--WGEPSV-----PAATAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQQQ 473

  Fly   752 EQQLRKNS 759
            :||.:..|
  Rat   474 QQQQQATS 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:405418 41/197 (21%)
NumblXP_006228627.1 PTB_Numb 91..225 CDD:241298 29/143 (20%)
PHA03247 <286..627 CDD:223021 52/284 (18%)
NumbF 314..398 CDD:461874 21/150 (14%)

Return to query results.
Submit another query.