DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8312 and Fam43a

DIOPT Version :10

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001034091.1 Gene:Fam43a / 288031 RGDID:1304790 Length:430 Species:Rattus norvegicus


Alignment Length:517 Identity:133/517 - (25%)
Similarity:214/517 - (41%) Gaps:130/517 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 DLLYGSRQEHVGRTGGYDQNDQLTSKAYRTLTRS--------LGKLWR-RTHSVDISTPDPEFKV 266
            :||..:......:..||..:  |...|..:|.|:        :|.::| :...:.|::.||.:.|
  Rat    10 ELLAEAPPRQASKPKGYAVS--LHYSALSSLARACPEGALSRVGSMFRSKRKKLHITSEDPTYTV 72

  Fly   267 SYLGNVLTGWAKAGEGCVEKQLNTLWRNYTQHSKPDVIMRLKVCASGLKAT-TRQHGLTE----Y 326
            .||||..|..|: |:||.:..:..:| :.::..:....|:|.|.|.|::.. ..:..|..    |
  Rat    73 LYLGNATTIQAR-GDGCTDLAVGKIW-SKSEAGRQGTKMKLTVSAQGIRMVHAEERALRRPGHLY 135

  Fly   327 WAHRITYCCAPKNYPRVFCWIYRHEGRKLKHE---LRCHAVLCSKEKIAQDICDTLRENLESALR 388
            ..||:|||.|....|:||.|:||||   |||:   |||||||.||.:.||.:...|.:...:||.
  Rat   136 LLHRVTYCVADARLPKVFAWVYRHE---LKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALA 197

  Fly   389 EFKREKILKQNARLSLANAV--YDNPSLPRRKIMLSVGGNNYRPPLERSKSAPKLMAI-EEAIGE 450
            ||||.| .:.:||......|  :..|.:|.||::|. |...|:||:|||:|||||.:| |:.:||
  Rat   198 EFKRLK-RRDDARHQQQELVGAHTIPLVPLRKLLLH-GPCCYKPPVERSRSAPKLGSITEDLLGE 260

  Fly   451 EEGDEIEDTNEPEMMPCCQKDSLYPAMTLGRRRCRRGHSIRRTGKIQSFSPCCSSHMAKELPQEE 515
            ::.:|:::..|.|.:..|.::                                     :|..:||
  Rat   261 QQEEELQEEEEEEHLEGCLEE-------------------------------------EEEEEEE 288

  Fly   516 TKTMAAAGSSANDGSDSDDFEKLLKFDTTLS-NELLPYFDMQLHKNSSQSMVSLSELKEEEGEPL 579
            .:.....|..|.:.:::   ::.|.....|. .:||...:....:......|||.   ...|.||
  Rat   289 EEDRVGDGDPAEEEAET---QRALVVAMQLECEDLLDPLENGHEEALGDGGVSLG---PSSGTPL 347

  Fly   580 SLLPTINSDPSADPEADYNAEDHDVTAPRRSGVCSDGE---EDFLDDADDHYFRHAAMLTMLHRS 641
            .|                            ||..||.:   ...:.|..|..|.:          
  Rat   348 PL----------------------------SGCASDMKAQLSQLISDLGDLSFGN---------- 374

  Fly   642 SMRKMRAADQTSLKYRHQTQSSISSNASSSTTASTSAAAGGG----SAQQGLTSPDSDEGSI 699
                    |.::|    ::...::...|..:|.|.|:..|||    ||..|..|..:|..|:
  Rat   375 --------DVSTL----ESDLRVTRLLSGESTGSESSIEGGGLDATSASPGNPSGPADSTSL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:405418 73/188 (39%)
Fam43aNP_001034091.1 PID_2 69..256 CDD:405418 75/193 (39%)

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