DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8312 and Fam43a

DIOPT Version :9

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001034091.1 Gene:Fam43a / 288031 RGDID:1304790 Length:430 Species:Rattus norvegicus


Alignment Length:517 Identity:133/517 - (25%)
Similarity:214/517 - (41%) Gaps:130/517 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 DLLYGSRQEHVGRTGGYDQNDQLTSKAYRTLTRS--------LGKLWR-RTHSVDISTPDPEFKV 266
            :||..:......:..||..:  |...|..:|.|:        :|.::| :...:.|::.||.:.|
  Rat    10 ELLAEAPPRQASKPKGYAVS--LHYSALSSLARACPEGALSRVGSMFRSKRKKLHITSEDPTYTV 72

  Fly   267 SYLGNVLTGWAKAGEGCVEKQLNTLWRNYTQHSKPDVIMRLKVCASGLKAT-TRQHGLTE----Y 326
            .||||..|..|: |:||.:..:..:| :.::..:....|:|.|.|.|::.. ..:..|..    |
  Rat    73 LYLGNATTIQAR-GDGCTDLAVGKIW-SKSEAGRQGTKMKLTVSAQGIRMVHAEERALRRPGHLY 135

  Fly   327 WAHRITYCCAPKNYPRVFCWIYRHEGRKLKHE---LRCHAVLCSKEKIAQDICDTLRENLESALR 388
            ..||:|||.|....|:||.|:||||   |||:   |||||||.||.:.||.:...|.:...:||.
  Rat   136 LLHRVTYCVADARLPKVFAWVYRHE---LKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALA 197

  Fly   389 EFKREKILKQNARLSLANAV--YDNPSLPRRKIMLSVGGNNYRPPLERSKSAPKLMAI-EEAIGE 450
            ||||.| .:.:||......|  :..|.:|.||::|. |...|:||:|||:|||||.:| |:.:||
  Rat   198 EFKRLK-RRDDARHQQQELVGAHTIPLVPLRKLLLH-GPCCYKPPVERSRSAPKLGSITEDLLGE 260

  Fly   451 EEGDEIEDTNEPEMMPCCQKDSLYPAMTLGRRRCRRGHSIRRTGKIQSFSPCCSSHMAKELPQEE 515
            ::.:|:::..|.|.:..|.::                                     :|..:||
  Rat   261 QQEEELQEEEEEEHLEGCLEE-------------------------------------EEEEEEE 288

  Fly   516 TKTMAAAGSSANDGSDSDDFEKLLKFDTTLS-NELLPYFDMQLHKNSSQSMVSLSELKEEEGEPL 579
            .:.....|..|.:.:::   ::.|.....|. .:||...:....:......|||.   ...|.||
  Rat   289 EEDRVGDGDPAEEEAET---QRALVVAMQLECEDLLDPLENGHEEALGDGGVSLG---PSSGTPL 347

  Fly   580 SLLPTINSDPSADPEADYNAEDHDVTAPRRSGVCSDGE---EDFLDDADDHYFRHAAMLTMLHRS 641
            .|                            ||..||.:   ...:.|..|..|.:          
  Rat   348 PL----------------------------SGCASDMKAQLSQLISDLGDLSFGN---------- 374

  Fly   642 SMRKMRAADQTSLKYRHQTQSSISSNASSSTTASTSAAAGGG----SAQQGLTSPDSDEGSI 699
                    |.::|    ::...::...|..:|.|.|:..|||    ||..|..|..:|..|:
  Rat   375 --------DVSTL----ESDLRVTRLLSGESTGSESSIEGGGLDATSASPGNPSGPADSTSL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:373244 73/188 (39%)
Fam43aNP_001034091.1 PID_2 69..256 CDD:258856 75/193 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334812
Domainoid 1 1.000 111 1.000 Domainoid score I6102
eggNOG 1 0.900 - - E1_KOG4448
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003422
OrthoInspector 1 1.000 - - otm44492
orthoMCL 1 0.900 - - OOG6_109265
Panther 1 1.100 - - LDO PTHR11232
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2312
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.740

Return to query results.
Submit another query.