DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8312 and fam43a

DIOPT Version :10

Sequence 1:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001107499.1 Gene:fam43a / 100135352 XenbaseID:XB-GENE-5860868 Length:353 Species:Xenopus tropicalis


Alignment Length:237 Identity:88/237 - (37%)
Similarity:132/237 - (55%) Gaps:31/237 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 LTRSLGKLWR-RTHSVDISTPDPEFKVSYLGNVLTGWAKAGEGCVEKQLNTLWRNYTQHSKPDVI 304
            ||| :|.::: :...:.|:..||.:.|.||||..|..:| ||||.:..::.:| :.::..|....
 Frog    45 LTR-VGSMFKSKRKKIKITGEDPTYTVLYLGNATTLQSK-GEGCTDLAVSKIW-SKSEMGKHGTK 106

  Fly   305 MRLKVCASGL-------KATTRQHGLTEYWAHRITYCCAPKNYPRVFCWIYRHEGRKLKHE---L 359
            |:|.:.:.|:       ||....|   .|..||:|||.|....|::|.||||||   :||:   |
 Frog   107 MKLTISSQGIRMVHVEDKAKRPGH---LYLLHRVTYCVADPRLPKIFAWIYRHE---MKHKAVML 165

  Fly   360 RCHAVLCSKEKIAQDICDTLRENLESALREFKREKILKQNARLSLANAVYDN--PSLPRRKIMLS 422
            ||||||.||.:.|:.:...|.:...:||.||||.| .:::||......:.:.  |.:|.||::  
 Frog   166 RCHAVLVSKPEKAKAMALLLYQTSANALAEFKRLK-RREDARHQQQQLIGEQSIPLVPMRKLL-- 227

  Fly   423 VGGNNYRPPLERSKSAPKLMAIEEAI-GEEEGD-----EIED 458
            .|...|:||:|||:|||||.:|.|.: ||||.:     |.||
 Frog   228 NGQCCYKPPVERSRSAPKLGSITEDLQGEEEEERAMSFECED 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8312NP_649918.1 PID_2 263..442 CDD:405418 71/190 (37%)
fam43aNP_001107499.1 PID_2 67..252 CDD:405418 73/195 (37%)

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