DRSC/TRiP Functional Genomics Resources

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Protein Alignment P58IPK and JEM1

DIOPT Version :9

Sequence 1:NP_649916.1 Gene:P58IPK / 41161 FlyBaseID:FBgn0037718 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_012462.3 Gene:JEM1 / 853372 SGDID:S000003609 Length:645 Species:Saccharomyces cerevisiae


Alignment Length:614 Identity:127/614 - (20%)
Similarity:204/614 - (33%) Gaps:249/614 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 AVQDFSRVLELKPDFMAARI--QRGVVHMKSGEYEQAIQDFDQVLQEEPNNGLVLEHYSRLAPAQ 158
            |.::.|.|::|     |.:|  :.|::.:.:.::.:||..|::::..|...|    .:.:||..:
Yeast    65 ASENMSDVIQL-----ANQIYYKIGLIQLSNDQHLRAINTFEKIVFNETYKG----SFGKLAEKR 120

  Fly   159 EQ--------WVLVQQL-IQYSDH-------QNAIPM--------ITQLLEISPWAVPFRQARSD 199
            .|        |..|.|. .||:.:       :|.|..        |::||.|:|:.|.......|
Yeast   121 LQELYVDFGMWDKVHQKDDQYAKYLSLNETIRNKISSKDVSVEEDISELLRITPYDVNVLSTHID 185

  Fly   200 A--------------------YIAINDPLLAIADLRQVNRLTQDSTEGHYKIAQLLYTIGHATNA 244
            .                    |..|.|..||        .|:.|:....:.:..:|.|....::|
Yeast   186 VLFHKLAEEIDVSLAAAIILDYETILDKHLA--------SLSIDTRLSIHYVISVLQTFVLNSDA 242

  Fly   245 LKEIRECLKFDPEHKLCFPF---YKKLRKV---EKQLVN-AEQAREEKHF--------------- 287
            ...||:||..|.::..|...   ..||.||   ::|::: |..|.|.|.|               
Yeast   243 SFNIRKCLSIDMDYDKCKKLSLTISKLNKVNPSKRQILDPATYAFENKKFRSWDRIIEFYLKDKK 307

  Fly   288 -----------------------------AECIAAGEAVLRNEPEETMIRYEG------------ 311
                                         .|.:.....:.:|..|:..|. :|            
Yeast   308 PFITPMKILNKDTNFKNNYFFLEEIIKQLIEDVQLSRPLAKNLFEDPPIT-DGFVKPKSYYHTDY 371

  Fly   312 ----HKVLC--TCYTGDEQFGK-ALQQCKEALDIMKDAQVYCDRADALLGT-EMYDDAIHSFQAA 368
                ..:||  :..:.|.:..| |...||::|           |....|.| :.|.|| .|.|..
Yeast   372 LVYIDSILCQASSMSPDVKRAKLAAPFCKKSL-----------RHSLTLETWKHYQDA-KSEQKP 424

  Fly   369 L------DLEESN--------------TRAKEGIQRAKK-------------------------- 387
            |      |:..||              :|:|...|..|:                          
Yeast   425 LPETVLSDVWNSNPHLLMYMVNSILNKSRSKPHSQFKKQLYDQINKFFQDNGLSESTNPYVMKNF 489

  Fly   388 --LQKQSE--------------------------------------RRDYYKILGVKRSASKQEI 412
              ||||.:                                      ::||||||||..|||.:||
Yeast   490 RLLQKQLQTYKEHKHRNFNQQYFQQQQQQQQHQRHQAPPAAPNYDPKKDYYKILGVSPSASSKEI 554

  Fly   413 VKAYRKAAQKWHPD----NFRDEEKKVAEKKFIDIAAAKEVLTDPEKRRQFDNGED-------PL 466
            .|||....:|:|||    |..|:::.:.| ....|..|.|.|:|.:||:::|....       |.
Yeast   555 RKAYLNLTKKYHPDKIKANHNDKQESIHE-TMSQINEAYETLSDDDKRKEYDLSRSNPRRNTFPQ 618

  Fly   467 DPESNQRGGFHGEHPFGHFQHGSPFQFKF 495
            .|..|..    .::|...|..|:.|:..|
Yeast   619 GPRQNNM----FKNPGSGFPFGNGFKMNF 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P58IPKNP_649916.1 TPR_11 42..108 CDD:290150 4/11 (36%)
TPR repeat 43..71 CDD:276809
TPR repeat 76..106 CDD:276809 3/9 (33%)
TPR_11 78..142 CDD:290150 10/47 (21%)
TPR repeat 111..139 CDD:276809 6/29 (21%)
TPR_1 113..144 CDD:278916 6/32 (19%)
TPR_19 167..234 CDD:291240 18/102 (18%)
TPR repeat 190..220 CDD:276809 7/49 (14%)
TPR repeat 225..253 CDD:276809 6/27 (22%)
TPR repeat 309..337 CDD:276809 8/46 (17%)
TPR_11 312..373 CDD:290150 18/70 (26%)
TPR repeat 341..371 CDD:276809 9/36 (25%)
TPR repeat 376..399 CDD:276809 10/88 (11%)
DnaJ 395..>485 CDD:223560 35/100 (35%)
DnaJ 396..460 CDD:278647 30/67 (45%)
JEM1NP_012462.3 DnaJ 536..>644 CDD:223560 39/113 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR44140
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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