DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P58IPK and dnajc4

DIOPT Version :9

Sequence 1:NP_649916.1 Gene:P58IPK / 41161 FlyBaseID:FBgn0037718 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_997842.1 Gene:dnajc4 / 324373 ZFINID:ZDB-GENE-030131-3093 Length:237 Species:Danio rerio


Alignment Length:155 Identity:32/155 - (20%)
Similarity:53/155 - (34%) Gaps:59/155 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 IRYEGHKVLC-TCYTGDEQFGKALQQCKEALDIMKDAQVYCDRADALLGTEMYDDAIHSFQAALD 370
            :::|.|..|| ||:.                        ||..:..|...    .|.|..|.   
Zfish     1 MQWEAHIRLCQTCFW------------------------YCRSSQRLFSL----SAAHRSQT--- 34

  Fly   371 LEESNTRAKEGIQRAKKLQKQSERRDYYKILGVKRSASKQEIVKAYRKAAQKWHPDNFRDEEKKV 435
                                     :||::||||..|:.::|..|:...::|.|||:  |.....
Zfish    35 -------------------------NYYELLGVKPDATLEQIKFAFFDKSKKLHPDS--DPSNPG 72

  Fly   436 AEKKFIDIAAAKEVLTDPEKRRQFD 460
            ...:|:.:..|..||:....|:.:|
Zfish    73 LHTQFVQLNEAYRVLSKEGSRQDYD 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P58IPKNP_649916.1 TPR_11 42..108 CDD:290150
TPR repeat 43..71 CDD:276809
TPR repeat 76..106 CDD:276809
TPR_11 78..142 CDD:290150
TPR repeat 111..139 CDD:276809
TPR_1 113..144 CDD:278916
TPR_19 167..234 CDD:291240
TPR repeat 190..220 CDD:276809
TPR repeat 225..253 CDD:276809
TPR repeat 309..337 CDD:276809 6/28 (21%)
TPR_11 312..373 CDD:290150 11/61 (18%)
TPR repeat 341..371 CDD:276809 6/29 (21%)
TPR repeat 376..399 CDD:276809 1/22 (5%)
DnaJ 395..>485 CDD:223560 20/66 (30%)
DnaJ 396..460 CDD:278647 19/63 (30%)
dnajc4NP_997842.1 DnaJ 35..97 CDD:278647 19/63 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592352
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.