DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8301 and TFIIIA

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001322779.1 Gene:TFIIIA / 843536 AraportID:AT1G72050 Length:427 Species:Arabidopsis thaliana


Alignment Length:441 Identity:99/441 - (22%)
Similarity:161/441 - (36%) Gaps:117/441 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 EEEEQQQQYDEE---VEEPITDESAPPQLTI-SYACKFC-LRPQENYQLQQLLLEHINASHDPEQ 217
            ||.......|.:   .||...|.....:..| :|.|::| :...:||    |:.:||.:.|.   
plant     2 EEINPSSSVDNKRDMAEEAKVDVKTSAKKDIRNYLCQYCGISRSKNY----LITKHIQSHHQ--- 59

  Fly   218 PYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECAL--C 280
                .|.|....|.|.......||:    |.|..||.::....:|:.|::.:..|..|.|.:  |
plant    60 ----MELEEERDDEACEVDEESSSN----HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDC 116

  Fly   281 EKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQ----RHLMCH------------------ 323
            ...:..:..||.|:..|. .:.|||....|:..|..|    ||:..:                  
plant   117 AASYRRKDHLNRHLLTHK-GKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGDGDK 180

  Fly   324 ----------EATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCAN------CTE 372
                      |.:.||...:::|..|..||.           ...:|..:|.:|:.      |.|
plant   181 DNTCKGDDDKEKSGSGGCEKENEGNGGSGKD-----------NNGNGDSQPAECSTGQKQVVCKE 234

  Fly   373 VFASYAEKRIHMLERHRENLTAIERSECMLCRQP-----FSSEPDLIHHMSAEHLQRPGAPIIAN 432
            :....|.|....|::|:::...::..|. .|.:|     |::|..|..|:.:.|           
plant   235 IGCGKAFKYPSQLQKHQDSHVKLDSVEA-FCSEPGCMKYFTNEECLKSHIRSCH----------- 287

  Fly   433 NKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPH--AC--PHCSKRFKRAQDM 493
                       |:.....|||    .::|..::||...|.|...|.  .|  ..||..|.:|.::
plant   288 -----------QHINCEICGS----KHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNL 337

  Fly   494 KWHIK-THEKEKPNVCDV--CGKAFALKYVLTQHRLSHEVLEKNFKCNVCG 541
            :.|:| .|:..:|.||..  ||..||.|:|..:|..|      .:....||
plant   338 QKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS------GYHVYTCG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 77/359 (21%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 5/21 (24%)
C2H2 Zn finger 305..327 CDD:275368 7/53 (13%)
C2H2 Zn finger 338..359 CDD:275368 3/20 (15%)
C2H2 Zn finger 367..384 CDD:275368 5/22 (23%)
C2H2 Zn finger 400..420 CDD:275368 6/24 (25%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 7/22 (32%)
C2H2 Zn finger 508..528 CDD:275368 8/21 (38%)
C2H2 Zn finger 537..557 CDD:275368 2/5 (40%)
C2H2 Zn finger 565..582 CDD:275368
TFIIIANP_001322779.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.