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Protein Alignment CG8301 and Zfp334

DIOPT Version :9

Sequence 1:	NP_649915.1	Gene:	CG8301 / 41160	FlyBaseID:	FBgn0037717	Length:	607	Species:	Drosophila melanogaster
Sequence 2:	XP_006235694.1	Gene:	Zfp334 / 685574	RGDID:	1592574	Length:	678	Species:	Rattus norvegicus

Alignment Length:	572	Identity:	156/572 - (27%)
Similarity:	229/572 - (40%)	Gaps:	96/572 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 KLSHIYDKIDASSLEDDEIGQEDLEPAEEHQETETTKPTTTVSAETQPN-----NTASDPIEIFV 145
            |:.|.||.           |...|:...|....:.:|....|:||....     :|.:|......
  Rat   130 KMLHKYDP-----------GGNGLKNNSEDTVIKPSKANGKVAAEHDGRGKPALHTKADRSHSAA 183

  Fly   146 DAVDIDEAEE--EEEEEEQQQQYDEEVEEPITDESAPPQLTISYAC-----KFCLRPQENYQLQQ 203
            ..:...|..:  .:.|:..||..::.|.:|........:...:..|     ..|...::.:..:.
  Rat   184 KRIKWSEVGDVRSQGEDLTQQLNNQAVSQPSEHNEGEQESACTKECPERKRNECAECRKTFSKRS 248

  Fly   204 LLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEK 268
            .|:.|:.. |..|:||.|..|...|:..||.|.|.:....|:.:.|..|||.:.|:..|..|...
  Rat   249 TLIVHLRI-HTGERPYACNYCRKTFRIKASLTRHQRIHTGERPYKCKECGKAFIDKSALIVHQRI 312

  Fly   269 YHSETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSR 333
            :..|..:||..|.|.|:.:.:|..|.:.|..::.:||:.  |...|..:.:|:.|:.||.|   .
  Rat   313 HGGEKSYECIECGKTFFRKSALAEHFRSHTGEKPYKCKE--CGNAFGKKSYLIVHQRTHRG---E 372

  Fly   334 KSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHREN------- 391
            |...|..|||||..|..|..| .|.|.|||||:|..|.:.|...:...:|:.....|.
  Rat   373 KPNECKECGKTFFCLSALTAH-QRIHTGEKPYECKECDKTFFCQSALNVHLRSHTGEKPYKCRQC 436

  Fly   392 ---------LTA---IERS----ECMLCRQPFSSEPDL-IH---HMSAEH-----LQRP--GAPI 429
                     |.|   |.|.    ||..|.:.|..:..| ||   |...:|     ..||  |...
  Rat   437 GKFLCTKSALVAHQVIHRGKKSFECGECGKLFYLKSTLTIHQRTHTGEKHGVLSKWSRPSTGKSN 501

  Fly   430 IANNKRV----------------------LQQKR---ERQYSGLFQCGSCSQRFNMKSALERHAA 469
            ....|||                      :..||   ||.|    :|..|.:.:..||||..|..
  Rat   502 CGEQKRVEAKENLHECHDHKRTAHKSSRRVAHKRTIWERPY----ECQECGRTYCRKSALRHHQK 562

  Fly   470 VHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKN 534
            .|: .:||:.|..|.|.|.:......|.:||..|||:.|..|||:|..|...|.|:..| ..||.
  Rat   563 THT-GERPYECKECGKTFCQKVSFTEHQRTHTGEKPHKCKECGKSFRHKSAFTVHKRIH-TGEKP 625

  Fly   535 FKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAH 586
            :.||.||::|....:|..||:.|||:..|:|.:|::.|........| ||.|
  Rat   626 YACNECGKSYRRLWTLTEHQKIHTGEKPYECSICKKSFRHKSNFLLH-QKTH 676

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.