DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and LOC682225

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_017445398.1 Gene:LOC682225 / 682225 RGDID:1585764 Length:544 Species:Rattus norvegicus


Alignment Length:538 Identity:125/538 - (23%)
Similarity:197/538 - (36%) Gaps:159/538 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 ETQPNNTASDPIEIFVDAVDIDEAEEEEEEEEQ-------------------QQQYDEEVEEPIT 175
            :..||:...: :.|:..|.:.:|..:...|..|                   :|:.....:||  
  Rat    63 DQDPNSIVHN-VNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEP-- 124

  Fly   176 DESAPPQLTISYACKF--CLRPQENY-------QLQQLLL-----------EHINASHDPEQPYN 220
                         |||  |:    |:       |.|::.:           .|.|:.|:      
  Rat   125 -------------CKFKDCI----NFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHE------ 166

  Fly   221 CPECEARFQDAASRTVHLKSS-------HVEKQHACGVCGKKYG--DRHNLRHHVEKYHSETDFE 276
                           |.||.|       |:.:::  |.|.|.|.  .|:...|..||:     ::
  Rat   167 ---------------VMLKQSNSTGNKPHIFRKY--GQCFKIYSSFSRYQNDHTSEKF-----YK 209

  Fly   277 CALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFC 341
            |..|.|.|.....|..|.|.|.  |::.|:.:.|.:.|........|.:.|...::.||..   |
  Rat   210 CIKCRKSFLHLSQLKVHYKIHY--RKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSD---C 269

  Fly   342 GKTFIHLKTLRWH---------------------------IYRQHGGEKPYKCANCTEVFASYAE 379
            .|:||:..:||.|                           .|..|.|||.|||:.|.:.|.    
  Rat   270 DKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFT---- 330

  Fly   380 KRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQ 444
             |.:.|..|:...|..:..:|..|.:.|:.:..|..|......::|                   
  Rat   331 -RKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKP------------------- 375

  Fly   445 YSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCD 509
                ::|..|.:.|..|..|..|..:|: .::|:.|..|...|.:...::.|...|..|||..|.
  Rat   376 ----YKCSECKKCFTRKYHLTDHQRIHT-VEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCS 435

  Fly   510 VCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVT 574
            .|.|.|..|..|.:|:..| ..||.:||:.|.:.:.....||.|||.|||:..|||..|...|:.
  Rat   436 ECDKGFTYKGHLRRHQKIH-TGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIE 499

  Fly   575 HIKLKTHMQKAHAASQPH 592
            :.||::| ||.|...:|:
  Rat   500 NNKLRSH-QKVHIGEKPY 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 78/363 (21%)
C2H2 Zn finger 221..241 CDD:275368 3/19 (16%)
C2H2 Zn finger 249..269 CDD:275368 7/21 (33%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 4/21 (19%)
C2H2 Zn finger 338..359 CDD:275368 8/47 (17%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 4/19 (21%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..582 CDD:275368 5/16 (31%)
LOC682225XP_017445398.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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