DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and znf420

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001016394.1 Gene:znf420 / 549148 XenbaseID:XB-GENE-5724906 Length:410 Species:Xenopus tropicalis


Alignment Length:471 Identity:125/471 - (26%)
Similarity:189/471 - (40%) Gaps:81/471 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DASSLEDDEIGQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEEEEE 159
            |..|||..| ...|.:.:....||...:|.::.::....|:    |.|...:|......:.|..:
 Frog     7 DLPSLEMKE-SHNDEDNSRAASETSNGQPVSSRNSSEGSNS----PAETGSEAEGNLPGQSENTD 66

  Fly   160 EEQQQQYD--EEVEEPITDESAPPQLTISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCP 222
            .|..:..|  ::.:|.:|.|:....:     ||..|                       ..|.|.
 Frog    67 SELLETPDLFDDDDESVTGETKKNDI-----CKKVL-----------------------AKYMCM 103

  Fly   223 ECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSET-DFECALCEKRFYT 286
            .|...|......|||.::...|:.::|.||||::....:|..|: :.|||. .|.|..|.|.|..
 Frog   104 VCGKMFYRKPDYTVHQRTHTGERPYSCTVCGKRFTQSSSLARHL-RVHSEVKPFMCTDCGKSFSQ 167

  Fly   287 RKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTL 351
            ...|..|.:.|..:|.:.|..  |.:.|....:|:.|:..|:|   .||.||..|||:|.....|
 Frog   168 NSHLVTHQRIHTGERPYSCNE--CGKSFSGSSNLVKHKKVHAG---EKSWHCPGCGKSFTCSSQL 227

  Fly   352 RWHIYRQHGGEKPYKCANCTEVFAS----YAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPD 412
            |.|: |.|..||||.|..|.:.|:|    ...:|:|..||         ...|..|.:.|:....
 Frog   228 RTHL-RVHTNEKPYACEICGKCFSSSSNLVTHQRVHTGER---------PYSCTECGKRFTQSSS 282

  Fly   413 LIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRP 477
            |:.|.....:::                       ||.|..|.:.|:..|.|.:|...|:| :||
 Frog   283 LVVHWRVHTVEK-----------------------LFTCSDCGKSFSHNSLLIKHQKTHTE-ERP 323

  Fly   478 HACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGR 542
            :.|..|.|.|..:..:..|.:.|.:|:|..|..|||.|..|..|.:|...|.. :|.:.|..||.
 Frog   324 YVCMECGKGFTGSSALVRHQRVHTEERPYTCSECGKRFKDKSSLVRHSRVHSE-DKPYACASCGE 387

  Fly   543 AYLFEKSLRLHQRTHT 558
            .:....:|..|.||||
 Frog   388 TFNDGSNLLEHLRTHT 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 84/314 (27%)
C2H2 Zn finger 221..241 CDD:275368 6/19 (32%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 5/20 (25%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..582 CDD:275368
znf420NP_001016394.1 CobT <8..>91 CDD:130712 18/87 (21%)
C2H2 Zn finger 102..122 CDD:275368 6/19 (32%)
zf-H2C2_2 118..139 CDD:372612 7/20 (35%)
C2H2 Zn finger 130..150 CDD:275368 7/20 (35%)
COG5048 <141..386 CDD:227381 82/285 (29%)
C2H2 Zn finger 158..178 CDD:275368 6/19 (32%)
C2H2 Zn finger 186..206 CDD:275368 5/21 (24%)
C2H2 Zn finger 214..234 CDD:275368 9/20 (45%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 270..290 CDD:275368 5/19 (26%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
C2H2 Zn finger 326..346 CDD:275368 5/19 (26%)
C2H2 Zn finger 354..374 CDD:275368 8/19 (42%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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