DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp960

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001005358.2 Gene:Zfp960 / 449000 MGIID:3052731 Length:546 Species:Mus musculus


Alignment Length:507 Identity:142/507 - (28%)
Similarity:224/507 - (44%) Gaps:79/507 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 EDDEIGQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIE-IFVDAVDIDEAEEEEEEEEQQ 163
            |:|.| :||.|        .:.:||..:..: .|:||...|.| |..|........:..::....
Mouse    57 EEDNI-EEDCE--------NSGRPTRHLQRD-GPSNTGEKPFECIQYDGAFARNHHQLHKDTGSF 111

  Fly   164 QQY-DEEVEEPITDESAPPQLTISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEAR 227
            ..| |.::..                     ||                 |..|:.|:..:|...
Mouse   112 MSYTDRQIHR---------------------RP-----------------HTEEKVYDGNQCGKT 138

  Fly   228 FQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKSLNY 292
            |.......:...:...||.:.|..|||.:....||..|...:..|..::|..|.|.|....:|:.
Mouse   139 FSCHNHFEIRKGTYTGEKPYECNQCGKAFARHSNLLDHKRIHTGEKPYKCKQCGKDFTHHSTLHI 203

  Fly   293 HMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYR 357
            |.:.|..::.:||..  |    ::..||.||:.||:|   .|...|..|||||.:.|||:.| .|
Mouse   204 HKRIHTREKTYKCNQ--C----MTIAHLQCHKITHTG---EKPYACKKCGKTFAYHKTLQIH-ER 258

  Fly   358 QHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHL 422
            .|.|||.|:|..|.:.|..:...:||  ||..   |..:..||..|.:.|:...:|.:|.:....
Mouse   259 THTGEKLYQCNQCAKAFPYHRTLQIH--ERTH---TGEKPYECNQCGKAFACLRNLQNHKTTHTG 318

  Fly   423 QRP------GAPIIANNKRVLQQKRERQYSG--LFQCGSCSQRFNMKSALERHAAVHSEKDRPHA 479
            ::|      |.   |..:.|..|..||.::|  .|:|..|.:.|...|.|:||...|: .::|:.
Mouse   319 EKPYECNQCGR---AFRQYVYLQCHERIHTGEKPFECNQCGKAFARHSTLQRHKRTHT-GEKPYE 379

  Fly   480 CPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAY 544
            |..|.|.|...:.::.|.:||..|||..|:.||||||....|..|:.:| ..|:.::||.||:|:
Mouse   380 CNQCGKAFACPRYLQIHKRTHTGEKPYECNQCGKAFACHRYLQIHKRTH-TGERPYECNQCGKAF 443

  Fly   545 LFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQ 596
            ....:|::|:|||||:..|:|:.|.:.|.....|:.| ::.|...:|:..:|
Mouse   444 TCRSNLQIHKRTHTGERPYECNQCGKAFTCRSNLQIH-KRTHTGEKPYECNQ 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 91/317 (29%)
C2H2 Zn finger 221..241 CDD:275368 2/19 (11%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 338..359 CDD:275368 11/20 (55%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Zfp960NP_001005358.2 KRAB 13..>54 CDD:214630
KRAB 13..52 CDD:279668
C2H2 Zn finger 133..152 CDD:275368 2/18 (11%)
COG5048 156..525 CDD:227381 117/360 (33%)
C2H2 Zn finger 160..180 CDD:275368 7/19 (37%)
zf-H2C2_2 172..197 CDD:290200 8/24 (33%)
C2H2 Zn finger 188..208 CDD:275368 6/19 (32%)
zf-H2C2_2 224..249 CDD:290200 14/27 (52%)
C2H2 Zn finger 240..260 CDD:275368 11/20 (55%)
C2H2 Zn finger 268..288 CDD:275368 7/21 (33%)
zf-H2C2_2 281..305 CDD:290200 9/28 (32%)
C2H2 Zn finger 296..316 CDD:275368 5/19 (26%)
zf-H2C2_2 308..333 CDD:290200 5/27 (19%)
C2H2 Zn finger 324..344 CDD:275368 6/22 (27%)
zf-H2C2_2 336..361 CDD:290200 8/24 (33%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
zf-H2C2_2 365..389 CDD:290200 9/24 (38%)
C2H2 Zn finger 380..400 CDD:275368 5/19 (26%)
zf-H2C2_2 392..417 CDD:290200 12/24 (50%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-H2C2_2 420..445 CDD:290200 9/25 (36%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
zf-H2C2_2 448..473 CDD:290200 11/24 (46%)
C2H2 Zn finger 464..484 CDD:275368 5/20 (25%)
zf-H2C2_2 476..501 CDD:290200 5/20 (25%)
C2H2 Zn finger 492..512 CDD:275368 1/3 (33%)
zf-H2C2_2 505..529 CDD:290200
C2H2 Zn finger 520..540 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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