DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp560

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001004190.2 Gene:Zfp560 / 434377 MGIID:1915280 Length:754 Species:Mus musculus


Alignment Length:658 Identity:163/658 - (24%)
Similarity:243/658 - (36%) Gaps:176/658 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NWNLKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHIYDKIDASSLEDDEIGQE--DL 109
            :|.::::|...:.|:   |.|                |||:|      :...|.:...|:|  |:
Mouse   108 DWAIQLNPRGTMFQR---DIF----------------QLKMS------NEIQLPNSHNGKELCDI 147

  Fly   110 EPAEE----------HQETETTK---------------PTTTVSAETQPN------------NTA 137
            :|..|          :...|.|.               |..|.||:|.|.            :||
Mouse   148 KPPGEIIKEPPCSLTYIGIENTGNIYDCVQYGQLFPVCPKETSSADTGPGLRQYGKDFSMIASTA 212

  Fly   138 SDPIEI---FVDAVDIDEAEEEEEE------EEQQQQYDEEVE-----EPITDESAPPQLTI--- 185
            .....:   |:::.:..:..:.:..      ...:.:..|.|:     .|....:...|...   
Mouse   213 YQTTCVQSKFIESSEFQQVFDSQSSLQRPGGSHSEDKLSESVQCGDTFSPALSHAESAQTCTGKK 277

  Fly   186 SYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACG 250
            ||.||.|   .::::....|..|:. :|..|:||.|.||...|......|.|||:...||...|.
Mouse   278 SYECKEC---GKSFKYSANLNIHMR-THTGEKPYQCKECGKAFSRCYPLTQHLKTHTEEKPFECK 338

  Fly   251 V----------------------------CGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTR 287
            |                            |||.:..|..|..|:..:..|..:||..|.|.|.:.
Mouse   339 VCGKCFRNSSCLNDHFRVHTGIKPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYECKECGKAFPST 403

  Fly   288 KSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLR 352
            ..|..|||.|..:|.|:|.|  |.:.|.|...|:.|..||:|   .|...|..|||.|.....||
Mouse   404 SGLIKHMKSHMGERPFECDH--CGKAFASSSTLITHLRTHTG---EKPFECQVCGKAFTCSSYLR 463

  Fly   353 WHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHM 417
            .|: |.|.|||||.|..|...|.....     |.:|....|.....||.:|.:.|:....|.:|:
Mouse   464 IHM-RTHTGEKPYVCKECGRAFTERTS-----LTKHLRTHTGENPFECNMCGKAFACSSYLHNHI 522

  Fly   418 SAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPH 482
            .....::|                       :.|..|.:.|.:.|.|.:|..:|: .::||.|..
Mouse   523 RTHTGEKP-----------------------YVCKECGKAFTVSSHLSKHVRIHT-GEKPHKCEE 563

  Fly   483 CSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSH------------------- 528
            |.|.|.....:..||:||..|||..|..|||||.....|.:|:.||                   
Mouse   564 CGKAFTVRSGLTKHIRTHTGEKPYNCKECGKAFTTSSGLLEHKRSHTGEKPYECDQCGKAFASSS 628

  Fly   529 --------EVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKA 585
                    ...||.|:||.||:|:.....|.:|.|||||:..|.|..|.:.|..:..|..|: :.
Mouse   629 YLIAHLRIHTGEKPFECNECGKAFTCSSYLHIHMRTHTGEKPYDCKECGKTFAVYSHLSKHV-RI 692

  Fly   586 HAASQPHS 593
            |:..:.::
Mouse   693 HSGEKAYT 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 7/39 (18%)
COG5048 198..>508 CDD:227381 96/337 (28%)
C2H2 Zn finger 221..241 CDD:275368 8/19 (42%)
C2H2 Zn finger 249..269 CDD:275368 8/47 (17%)
C2H2 Zn finger 277..297 CDD:275368 8/19 (42%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Zfp560NP_001004190.2 KRAB 41..97 CDD:214630
KRAB 41..80 CDD:279668
COG5048 276..689 CDD:227381 131/451 (29%)
zf-C2H2 279..301 CDD:278523 6/25 (24%)
C2H2 Zn finger 281..301 CDD:275368 5/23 (22%)
zf-H2C2_2 293..318 CDD:290200 10/25 (40%)
C2H2 Zn finger 309..329 CDD:275368 8/19 (42%)
zf-H2C2_2 322..346 CDD:290200 8/23 (35%)
C2H2 Zn finger 337..357 CDD:275368 2/19 (11%)
zf-H2C2_2 350..373 CDD:290200 3/22 (14%)
C2H2 Zn finger 365..385 CDD:275368 6/19 (32%)
C2H2 Zn finger 393..413 CDD:275368 8/19 (42%)
zf-H2C2_2 406..430 CDD:290200 11/25 (44%)
C2H2 Zn finger 421..441 CDD:275368 7/21 (33%)
zf-H2C2_2 434..458 CDD:290200 11/26 (42%)
C2H2 Zn finger 449..469 CDD:275368 9/20 (45%)
zf-H2C2_2 461..485 CDD:290200 12/24 (50%)
C2H2 Zn finger 477..497 CDD:275368 5/24 (21%)
zf-H2C2_2 489..514 CDD:290200 7/29 (24%)
C2H2 Zn finger 505..525 CDD:275368 5/19 (26%)
zf-H2C2_2 520..541 CDD:290200 4/43 (9%)
C2H2 Zn finger 533..553 CDD:275368 6/19 (32%)
zf-H2C2_2 545..569 CDD:290200 8/24 (33%)
C2H2 Zn finger 561..581 CDD:275368 6/19 (32%)
zf-H2C2_2 574..598 CDD:290200 13/23 (57%)
C2H2 Zn finger 589..609 CDD:275368 8/19 (42%)
zf-H2C2_2 602..626 CDD:290200 4/23 (17%)
C2H2 Zn finger 617..637 CDD:275368 0/19 (0%)
zf-H2C2_2 629..654 CDD:290200 8/24 (33%)
C2H2 Zn finger 645..665 CDD:275368 8/19 (42%)
zf-H2C2_2 661..681 CDD:290200 9/19 (47%)
C2H2 Zn finger 673..693 CDD:275368 5/20 (25%)
C2H2 Zn finger 701..718 CDD:275368 163/658 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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