DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Rslcan18

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001242981.1 Gene:Rslcan18 / 432770 MGIID:5433745 Length:460 Species:Mus musculus


Alignment Length:475 Identity:126/475 - (26%)
Similarity:200/475 - (42%) Gaps:66/475 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LACQEAQLKLSHIYDKIDASSLEDDEIGQEDLEPAEEHQETETTKPTTTVSAE-TQPNNTASDPI 141
            |.|::. .||.|.........::.|:      ||        |.:....||.: .:.:...|..:
Mouse    44 LNCEQV-YKLLHSRRTRRGKGMDRDD------EP--------TLEKGKAVSPQWPEKSRLLSASV 93

  Fly   142 EI--FVD-AVDIDEAEEEEEEEEQQQQYDEEVEEPITDESAPPQLTISYACKFCLR-PQENYQLQ 202
            |:  |.| |:|....|.|..|..|...|.:.:.|   :.|....|..|::....:| .::|.:|:
Mouse    94 EMLSFRDVAIDFSAGELECLEPAQWDLYRDVMLE---NFSHLVFLGFSFSKPLLVRFLEKNQELR 155

  Fly   203 QLLLEHINASHDP--EQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHH 265
            .:..:   |:..|  ::||.|.||...|..::..|.||:....||.:.|.:|.|.:.....|.:|
Mouse   156 NVKRK---AATVPRGKKPYKCKECGKAFAKSSVLTQHLRIHTGEKPYTCDICDKAFSLPSILHNH 217

  Fly   266 VEKYHSETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGT 330
            .:.:..|..::|.:|.|.|....:|..|.|.|..::.:||  ..|.:.|:....|..|:..|:| 
Mouse   218 QKIHTGEKPYKCEVCGKAFLMPSTLTNHQKIHTGEKPYKC--EVCGKAFLMPSTLTNHQKIHTG- 279

  Fly   331 SSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAI 395
              .|...|..|||.|........| .|.|.|||||||..|.:.|::     :..|.||:...|..
Mouse   280 --EKPYECEVCGKKFSSPADFTKH-QRVHTGEKPYKCEECKKPFSN-----LSALSRHKVVHTGE 336

  Fly   396 ERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNM 460
            :|..|..|.:.:|....|..|..|...|:.                       ::|..|.:.|..
Mouse   337 KRYTCEKCGKAYSRSYHLSRHKKAHSGQKS-----------------------YKCKECGKMFYY 378

  Fly   461 KSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHR 525
            .|.|:||..:||| :||:.|..|.|.|....|:..|.:||::.|...||.||:.|.::...:..|
Mouse   379 SSDLKRHQRIHSE-ERPYECEECGKAFPSPSDVTQHARTHKRMKQYTCDECGECFTIQTTFSNLR 442

  Fly   526 LSHEVLE-KNFKCNVCGRAY 544
            ...  || |..:|..|.:.:
Mouse   443 KIR--LEGKPSECERCRKDF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 2/8 (25%)
COG5048 198..>508 CDD:227381 88/311 (28%)
C2H2 Zn finger 221..241 CDD:275368 7/19 (37%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 7/20 (35%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368 2/8 (25%)
C2H2 Zn finger 565..582 CDD:275368
Rslcan18NP_001242981.1 KRAB 96..154 CDD:214630 15/60 (25%)
KRAB 96..135 CDD:279668 11/41 (27%)
COG5048 168..458 CDD:227381 95/326 (29%)
C2H2 Zn finger 173..193 CDD:275368 7/19 (37%)
zf-H2C2_2 186..209 CDD:290200 8/22 (36%)
C2H2 Zn finger 201..221 CDD:275368 5/19 (26%)
zf-H2C2_2 216..236 CDD:290200 5/19 (26%)
C2H2 Zn finger 229..249 CDD:275368 7/19 (37%)
zf-H2C2_2 242..264 CDD:290200 7/23 (30%)
C2H2 Zn finger 257..277 CDD:275368 5/21 (24%)
zf-H2C2_2 270..294 CDD:290200 10/26 (38%)
C2H2 Zn finger 285..305 CDD:275368 7/20 (35%)
zf-H2C2_2 297..322 CDD:290200 12/25 (48%)
C2H2 Zn finger 313..333 CDD:275368 6/24 (25%)
zf-H2C2_2 325..350 CDD:290200 7/24 (29%)
C2H2 Zn finger 341..361 CDD:275368 5/19 (26%)
zf-H2C2_2 353..378 CDD:290200 7/47 (15%)
zf-C2H2 367..389 CDD:278523 7/21 (33%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
zf-H2C2_2 381..404 CDD:290200 11/23 (48%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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