DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and CG4360

DIOPT Version :10

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length:450 Identity:101/450 - (22%)
Similarity:155/450 - (34%) Gaps:108/450 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 QLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRH 264
            ::|.::.|......||.:...|..|:.:|:...:...|:|....|:.:.|..|.|.:.....|.:
  Fly   123 EVQSVISEEEVVVDDPRKKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTN 187

  Fly   265 HVEKYHSETDFECALCEKRFYTRKSLNYHMKWHNPDRQF---------------KCRHSGCERLF 314
            ||:.:..|..|.|.:|.|.|..:.:|..|:|.|......               |.|.|...:.:
  Fly   188 HVKIHTGEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAY 252

  Fly   315 ISQRH--LMCHEATHSGTSSR-------KSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANC 370
             .|:|  :...:..:||:.|.       |...|..|.:.|..|.||..| .|.|...|||||..|
  Fly   253 -QQQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNH-ERTHIDPKPYKCETC 315

  Fly   371 TEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAE-HLQRPG-------- 426
            .:.|:..|     .|..|::..|..:...|..|...|..:..|.:|:... |...||        
  Fly   316 DKSFSQLA-----TLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGG 375

  Fly   427 -------------APIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVH------- 471
                         ||:....:::.        |||..........|: ..|:.|..:|       
  Fly   376 GGAVTATVDHSMPAPLAPGTQQLT--------SGLLPNNLHGSTANI-IQLDHHPLLHFLDGSTT 431

  Fly   472 --------------------------------------SEKDRPHACPHCSKRFKRAQDMKWHIK 498
                                                  ...|||..|..|.:.|.:...:..|||
  Fly   432 VSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIK 496

  Fly   499 THEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHT 558
            ||..|||..|.:|...|.....|..|...| ..||.:.|:.|.:.:..:.:|:.|.|.||
  Fly   497 THTGEKPYKCKICEVNFRQVATLNNHMKIH-TGEKPYNCSFCPKQFRQKSTLQNHLRVHT 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..88 CDD:462262
COG5048 198..>508 CDD:227381 86/398 (22%)
C2H2 Zn finger 221..241 CDD:275368 5/19 (26%)
C2H2 Zn finger 249..269 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 4/23 (17%)
C2H2 Zn finger 338..359 CDD:275368 8/20 (40%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 3/19 (16%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 5/19 (26%)
SUF4-like 536..>586 CDD:411020 6/22 (27%)
C2H2 Zn finger 537..558 CDD:411020 5/20 (25%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..586 CDD:411020
C2H2 Zn finger 565..582 CDD:275368
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
zf-H2C2_2 157..181 CDD:463886 6/23 (26%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
zf-C2H2_8 281..366 CDD:464935 26/90 (29%)
C2H2 Zn finger 284..304 CDD:275368 8/20 (40%)
C2H2 Zn finger 312..332 CDD:275368 6/24 (25%)
zf-H2C2_2 325..349 CDD:463886 6/23 (26%)
C2H2 Zn finger 340..360 CDD:275368 5/19 (26%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 7/24 (29%)
C2H2 Zn finger 534..554 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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