DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8301 and D19B

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:691 Identity:145/691 - (20%)
Similarity:240/691 - (34%) Gaps:209/691 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NLKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHI-----------YDKIDASSLEDD 102
            :|.:...||.|:.:|:.||:|...::.|:..|.::..|...:           :|.:|.|:...|
  Fly    43 SLSVEQADGFPKNLCNVCFSKLNDLHDFQKQCVDSVQKFQDLVASNAFACQTNFDVLDTSAAVAD 107

  Fly   103 EIGQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEE-----EEEEEQ 162
            ..|:|:                         :|...||  :....::|.|.||:     |..|::
  Fly   108 LPGEEE-------------------------DNVHFDP--LLNSKIEIIENEEDVFKMLESVEKE 145

  Fly   163 QQQYDEEVEEPI----TDESAPPQLTISYACKFCLRPQENYQLQQL----LLEHINASHDPEQPY 219
            .::.:.|:|:|.    .|:|............|.:...::..|.|.    ......|...|:...
  Fly   146 VEEVEMEMEQPFGRVSQDDSFESGNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAA 210

  Fly   220 NCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRF 284
            ...|.|:...:..|.:.....:..:|.....:...: .|||.|            .:|.:|.::|
  Fly   211 KRQEEESEESEETSSSDDSDGNPKDKPKRKRIPATE-RDRHRL------------IDCHICHQKF 262

  Fly   285 YTRKSLNY--HMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGF--CGKTF 345
              :|::.|  |||.||....|:|....|.:.|.:...|..| ..|:.|.:.....|.:  |.|:|
  Fly   263 --KKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVH-VEHAHTETSAMHPCTYEGCNKSF 324

  Fly   346 IHLKTLRWHIYRQHGGEKP---YKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPF 407
            .....|.:|:.|.|..:.|   :.|..|.:||......:.||.:...|.|.    ..|.:|.:.|
  Fly   325 ARPVLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELP----FACEICGKRF 385

  Fly   408 SSEPDLIHHMSAEHLQRPGAPIIAN----------------NKRVLQQKRERQYSGLFQCGSCSQ 456
            .     |:.:..:||.|...  |.|                ||.:|...:|::|    :|..|..
  Fly   386 P-----INSVLRDHLLRHAG--IKNHVCPYCGVGKTTRQEWNKHILTHTKEKKY----ECRQCDH 439

  Fly   457 RFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVL 521
            ..:.|.||..|..|..||.:..||.:|.|.|.::...|.|.::|..||...|.:|||.|..:..|
  Fly   440 ASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGL 504

  Fly   522 TQHRLSHEVLE------------------------------------------------------ 532
            |:|..:||..:                                                      
  Fly   505 TKHLKTHEKRDLPKTQGTNALMGDGASGSSTIAKPSPHLRGRVERVDIAQLAGTVANPIPSVNLP 569

  Fly   533 -----------------------------------------KNFKCNVCGRAYLFEKSLRLHQRT 556
                                                     |:|.|..|.:.:..::.||.|:..
  Fly   570 SWSPQVNFTKKEGQHICPDCGKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYI 634

  Fly   557 HTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQP 597
            |||:..|:|.:|.:.|.....||||| |.|        |:|
  Fly   635 HTGEKPYECKVCGKHFRQEQVLKTHM-KVH--------DKP 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 10/37 (27%)
COG5048 198..>508 CDD:227381 80/336 (24%)
C2H2 Zn finger 221..241 CDD:275368 3/19 (16%)
C2H2 Zn finger 249..269 CDD:275368 4/19 (21%)
C2H2 Zn finger 277..297 CDD:275368 8/21 (38%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 7/22 (32%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..582 CDD:275368 6/16 (38%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871 11/39 (28%)
C2H2 Zn finger 255..275 CDD:275368 8/21 (38%)
C2H2 Zn finger 283..335 CDD:275368 13/52 (25%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
COG5048 <347..512 CDD:227381 49/179 (27%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 6/24 (25%)
C2H2 Zn finger 406..426 CDD:275368 3/19 (16%)
C2H2 Zn finger 434..455 CDD:275368 7/20 (35%)
C2H2 Zn finger 463..483 CDD:275368 6/19 (32%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 586..607 CDD:275368 0/20 (0%)
C2H2 Zn finger 615..635 CDD:275368 5/19 (26%)
zf-H2C2_2 627..652 CDD:290200 10/24 (42%)
C2H2 Zn finger 643..663 CDD:275368 9/20 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449740
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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