DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp846

DIOPT Version :10

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001128057.1 Gene:Zfp846 / 363022 RGDID:1564241 Length:547 Species:Rattus norvegicus


Alignment Length:513 Identity:147/513 - (28%)
Similarity:224/513 - (43%) Gaps:67/513 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SSLEDDEIGQEDLEPAEEHQETETT-------KPTTTVSAETQPNNTASDPI------EIFVDAV 148
            |.||::::.:|||:..|....|:.:       :..|:...:|..:::|.:..      |||    
  Rat    64 SWLEEEDLHREDLQEWEMPLGTQESTLHQDFLRGQTSSGVQTGRSHSARELCYYTQCGEIF---- 124

  Fly   149 DIDEAEEEEEEEEQQQQYDEEVEEPIT----DESAPPQLTISYACKFCLRPQENYQLQQLLLEHI 209
                 .|....:...:.:.......:|    |.||......:|.||.|   .:.:.....|..|:
  Rat   125 -----SEHSYFKTHVKTHSAWNTGHLTHSDHDASAQVHTIKTYPCKIC---GKAFGRSSNLNRHL 181

  Fly   210 NASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETD 274
            . ||..|:||.|.||...|...:....|.::...||.:.|..|||.:..|..|..|:..:.||..
  Rat   182 R-SHTGEKPYECKECGKAFTTYSRLVEHFRTHTGEKPYKCKDCGKAFAKRSGLITHISTHASEKP 245

  Fly   275 FECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEA-THSGTSSRKSEHC 338
            |.|..|.|.|.:...|:.|::.|:.:|.:.|:.  |.|.|::..:|..|.. ||||   .:...|
  Rat   246 FACKECGKAFASSPRLSQHIRIHSGERPYICKE--CGRAFLTSSYLRNHVGRTHSG---ERPYIC 305

  Fly   339 GFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLC 403
            |.|||.|.....||.|: |.|.||:||.|..|.:.|.:.:....|:.:.|...:..|    |..|
  Rat   306 GECGKAFHSYSNLRRHV-RTHSGERPYICKECGKAFLNSSYLHNHIRKTHSGEMPHI----CGEC 365

  Fly   404 RQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHA 468
            .:.|.:...|..|:.....:||..                       |..|.:.|...|.|.:|.
  Rat   366 GKVFHASSYLRRHLRTHSGERPCI-----------------------CKECGKAFLNSSYLRKHL 407

  Fly   469 AVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEK 533
            .:|: .|:|:.|..|.|.::|...:..|:||||.|||..||||||:|.....||:|...| ...|
  Rat   408 TIHT-GDKPYECKDCGKAYRRYNLLHDHLKTHEVEKPFECDVCGKSFQYFSYLTKHIRIH-TGTK 470

  Fly   534 NFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQP 591
            .:||..||:.:....|...|.|||||:..|:|..|::.|.:...|..|: |.||..:|
  Rat   471 PYKCKYCGKDFTTSSSRTEHIRTHTGERPYECMECEKTFTSSSNLIHHV-KIHAREKP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..88 CDD:462262
COG5048 198..>508 CDD:227381 91/310 (29%)
C2H2 Zn finger 221..241 CDD:275368 5/19 (26%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 6/22 (27%)
C2H2 Zn finger 338..359 CDD:275368 10/20 (50%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 10/19 (53%)
SUF4-like 536..>586 CDD:411020 18/49 (37%)
C2H2 Zn finger 537..558 CDD:411020 7/20 (35%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..586 CDD:411020 6/20 (30%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Zfp846NP_001128057.1 KRAB 14..70 CDD:214630 3/5 (60%)
C2H2 Zn finger 118..137 CDD:275368 4/27 (15%)
COG5048 160..528 CDD:227381 128/408 (31%)
C2H2 Zn finger 164..184 CDD:275368 5/23 (22%)
C2H2 Zn finger 192..212 CDD:275368 5/19 (26%)
C2H2 Zn finger 220..240 CDD:275368 7/19 (37%)
C2H2 Zn finger 248..268 CDD:275368 6/19 (32%)
C2H2 Zn finger 276..297 CDD:275368 6/22 (27%)
C2H2 Zn finger 305..325 CDD:275368 10/20 (50%)
C2H2 Zn finger 333..354 CDD:275368 4/20 (20%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 10/19 (53%)
C2H2 Zn finger 474..494 CDD:275368 6/19 (32%)
C2H2 Zn finger 502..522 CDD:275368 6/20 (30%)
C2H2 Zn finger 530..547 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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