DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8301 and Zfp870

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001156534.1 Gene:Zfp870 / 362845 RGDID:1597136 Length:556 Species:Rattus norvegicus


Alignment Length:599 Identity:128/599 - (21%)
Similarity:212/599 - (35%) Gaps:175/599 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ISPNDGLPQKICSDCFTKFCSINAFRL----------------------ACQEAQL-------KL 87
            :|..:.|.:|:.|....|||..:..|.                      ||:|.::       .|
  Rat    53 VSEYEKLWRKLSSQLVEKFCDYHESRQCAEIFSFNPGHSCPGLATFVKNACEEGRIGHSSLGVPL 117

  Fly    88 SHIYDKIDASSLEDDEIGQ-----EDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDA 147
            :|     .....||.|.||     ::|..:......:..|.|.|  .|...||            
  Rat   118 NH-----QVGPYEDQEYGQALYERKELGSSSSSLSLQMHKSTPT--GEKPSNN------------ 163

  Fly   148 VDIDEAEEEEEEEEQQQQYDEEVEEPITDESAPPQLTISYACKFCLRPQENYQLQQLLLEHINAS 212
                            :.::|::.                    |::..:.|:          .:
  Rat   164 ----------------KNFEEDLP--------------------CVKSSQMYE----------QN 182

  Fly   213 HDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGD-----RHN----------- 261
            ...::.|....|...|...:....|.|...|:|.:.|.:|||.:..     ||.           
  Rat   183 GCAKKSYMHKACGKGFAHPSPLQRHEKVHSVKKPYVCELCGKGFARLGNLLRHQRTGTGENPFLP 247

  Fly   262 ------------LRHHVEKYHSETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLF 314
                        ||..:..:..|..:.|..|.|.|........|.:.|...:.:.|:.  |.:.|
  Rat   248 DPYTRSLPRSACLRRRMSIHAGEKPYVCEQCGKTFLDSTYFRIHRRIHTGVKPYVCKQ--CGKAF 310

  Fly   315 ISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYRQ----HGGEKPYKCANCTEVFA 375
            .:.|:|..||.||   :..||..|..||..|..     |:.:::    |.|..||.|..|.:.| 
  Rat   311 TASRYLKSHELTH---TREKSYVCEQCGSAFTF-----WYQFQKHKVTHSGVNPYVCKQCGKGF- 366

  Fly   376 SYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQK 440
            :|:..    |:.|....|..:...|..|.:.|.|..:|..|.|....:|                
  Rat   367 TYSSS----LKTHERTHTGQKPYVCKHCGKTFGSSGNLKRHGSTHTGER---------------- 411

  Fly   441 RERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKP 505
                   |:.|..|.:.||..|:.:.|..:|: .:.|:.|..|.|....:..::.|.:.|..|||
  Rat   412 -------LYVCKQCGKSFNNHSSFQFHNRMHT-GENPYKCKQCGKDLASSSSLQNHERNHSGEKP 468

  Fly   506 NVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAY--LFEKSLRLHQRTHTGKTYYKCDLC 568
            ..|..|||||:....|.:|::.|.. ||.:.|..||:::  .||  :|:|:|.|:.:..|:|:.|
  Rat   469 YACLQCGKAFSSDSSLRKHKIMHSE-EKPYVCKHCGKSFRRFFE--VRVHERIHSSERPYECETC 530

  Fly   569 QERFVTHIKLKTHM 582
            ...|::...|:.|:
  Rat   531 GRGFLSSTHLRRHV 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 11/63 (17%)
COG5048 198..>508 CDD:227381 75/341 (22%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 8/47 (17%)
C2H2 Zn finger 277..297 CDD:275368 5/19 (26%)
C2H2 Zn finger 305..327 CDD:275368 7/21 (33%)
C2H2 Zn finger 338..359 CDD:275368 5/24 (21%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 4/19 (21%)
C2H2 Zn finger 508..528 CDD:275368 8/19 (42%)
C2H2 Zn finger 537..557 CDD:275368 8/21 (38%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Zfp870NP_001156534.1 KRAB 4..58 CDD:214630 1/4 (25%)
KRAB 4..43 CDD:279668
C2H2 Zn finger 194..211 CDD:275368 4/16 (25%)
zf-H2C2_2 204..228 CDD:290200 8/23 (35%)
C2H2 Zn finger 219..267 CDD:275368 8/47 (17%)
Ribosomal_L37ae <260..321 CDD:302811 15/62 (24%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 4/25 (16%)
C2H2 Zn finger 303..323 CDD:275368 7/21 (33%)
C2H2 Zn finger 331..351 CDD:275368 5/24 (21%)
COG5048 <355..543 CDD:227381 59/219 (27%)
C2H2 Zn finger 359..379 CDD:275368 6/24 (25%)
zf-H2C2_2 371..394 CDD:290200 5/26 (19%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..463 CDD:275368 4/19 (21%)
zf-H2C2_2 455..480 CDD:290200 11/24 (46%)
C2H2 Zn finger 471..491 CDD:275368 8/19 (42%)
zf-H2C2_2 483..508 CDD:290200 8/25 (32%)
C2H2 Zn finger 499..519 CDD:275368 8/21 (38%)
C2H2 Zn finger 527..547 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.