DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and prg

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:591 Identity:135/591 - (22%)
Similarity:209/591 - (35%) Gaps:163/591 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METCRTCAISMFVCDFENGSNNSHFLDLHHPNCWPSEMAQIRLQFANWNLKISPNDGLPQKICSD 65
            :.|||       :|......|:.:..|.....|....:|::....  |:::...|:.|.:.|||.
  Fly    14 VSTCR-------LCHHNTDPNSLNIFDDTVQFCKDVSIAEVSKSL--WSVQYDRNECLSELICSR 69

  Fly    66 CFTKFCSINAFRLACQEAQLKLSHIYDKIDASSLEDDEIGQEDLEPAEEHQETETTKPTTTVS-- 128
            |..........|...||.:..|              .|..:|.::...:|:......|...|.  
  Fly    70 CLEILEEAFELRKGMQEREQSL--------------QEQLKEMIKDHPKHRPGLNGNPGVFVPEE 120

  Fly   129 ----AETQPNNTASDPIEIFV-------DAVDIDEAEEEE---EEEEQQQQYDEEVEEPI----- 174
                .|..|.|.|....|.|.       :..|.|:.||||   ||:|:..|..|:|:.|:     
  Fly   121 GCIIVEVDPENLAESSEEEFALGSDGEYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAA 185

  Fly   175 -------------TDESAPPQLTISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEA 226
                         |.|:.|.:   ::.|::|   ...:.|.....||..|:|||..||       
  Fly   186 QMAAQQSVANNANTTEARPKR---AFLCQYC---DLGFTLPAECQEHELAAHDPNAPY------- 237

  Fly   227 RFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKSLN 291
                                     |                        |..|..:..||.:|.
  Fly   238 -------------------------C------------------------CNFCNIKLVTRPALI 253

  Fly   292 YHMK-WHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHI 355
            .|:| .|:|||.:.|.|  |.:.|:.:..|..|...|:|.   :...|..|.|:|.....|..|:
  Fly   254 SHIKTLHDPDRPYVCAH--CRKGFVRRSDLKKHTIVHTGV---RPFTCNVCSKSFSRNTNLTKHM 313

  Fly   356 YRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSA- 419
             |.|.|.||:.|..|...|.:..|     :.||..:...::..:|..|...||....||.|... 
  Fly   314 -RIHSGVKPFVCQQCPRSFQTAVE-----MMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVH 372

  Fly   420 -----EHLQRPG-----------APIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHA 468
                 |..|:.|           ..:.|..|...|.|..|.|    .|..|.:.|..:..|:||.
  Fly   373 TRRDMEQQQQMGLIPPMEGDLQQQALQAKQKAAAQTKNSRYY----HCDVCDRTFQRERDLQRHQ 433

  Fly   469 AVHSEKDRPHACPHCSKRFKRAQDMKWH-IKTHEKEKPN-VCDVCGKAF----ALKYVLTQHRLS 527
            |:|  .|...||..|::.|.|.:.::.| ::.|   .|: .|.:|..:|    .|:..|..|:|.
  Fly   434 ALH--MDSLFACKTCNQGFNRREQLQRHELEAH---GPSFTCGICCISFLHQIELENHLKVHQLQ 493

  Fly   528 HEVLEK 533
            |::.::
  Fly   494 HKMAQR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 18/83 (22%)
COG5048 198..>508 CDD:227381 79/329 (24%)
C2H2 Zn finger 221..241 CDD:275368 0/19 (0%)
C2H2 Zn finger 249..269 CDD:275368 1/19 (5%)
C2H2 Zn finger 277..297 CDD:275368 7/20 (35%)
C2H2 Zn finger 305..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 338..359 CDD:275368 7/20 (35%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 7/25 (28%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 5/20 (25%)
C2H2 Zn finger 508..528 CDD:275368 7/23 (30%)
C2H2 Zn finger 537..557 CDD:275368
C2H2 Zn finger 565..582 CDD:275368
prgNP_001260253.1 zf-AD 16..94 CDD:285071 19/100 (19%)
COG5048 <212..340 CDD:227381 45/197 (23%)
C2H2 Zn finger 239..260 CDD:275368 7/20 (35%)
C2H2 Zn finger 268..288 CDD:275368 6/21 (29%)
zf-H2C2_2 280..305 CDD:290200 8/27 (30%)
zf-C2H2 294..316 CDD:278523 7/22 (32%)
C2H2 Zn finger 296..316 CDD:275368 7/20 (35%)
zf-H2C2_2 308..331 CDD:290200 9/23 (39%)
C2H2 Zn finger 324..344 CDD:275368 6/24 (25%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 7/19 (37%)
C2H2 Zn finger 443..464 CDD:275368 5/20 (25%)
C2H2 Zn finger 470..490 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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