DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and CG18262

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:578 Identity:126/578 - (21%)
Similarity:192/578 - (33%) Gaps:213/578 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHIYDKIDASSLEDDEIGQEDLE---PAEEH 115
            |.||.|:......||     |:....|               ::.||.|.|.|:.:|   ..|.|
  Fly    42 PLDGYPEHFRLKHFT-----NSSSSLC---------------SNELESDPIAQDVVEVQGNEELH 86

  Fly   116 QETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEEEEEEEQQQQYDE---------EVE 171
            :|         ::.|..|               |::|.|||:||..::|.|..         |..
  Fly    87 EE---------LAKEASP---------------DLEEEEEEKEEGSKRQHYQRAAAMKNTLVETR 127

  Fly   172 EPITD--------ESAPPQLTISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARF 228
            |.:.|        |.:                           || |.:|:.|      |.|:..
  Fly   128 EDLLDIELDWTGGEQS---------------------------EH-NETHEEE------EGESDD 158

  Fly   229 QDAASRTVHLKSSHVEKQ--HACGVCGKKYGDRHNLRHHVEKYHSETD---FECALCEKRFYTRK 288
            .|.       |.|:..|.  ..|..|.:.|..:.:|:.|....|||.:   .:.:..|:....||
  Fly   159 DDT-------KDSNDTKDMLFQCDQCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRK 216

  Fly   289 SLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRW 353
                     .|.:.:||....|.:.|.::|.|..|...|:|.      .|..|||.|.....:..
  Fly   217 ---------GPPKVYKCNEEACNQTFRTERDLRGHRWKHTGI------FCDICGKPFTQSGNMMR 266

  Fly   354 HIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMS 418
            |..| |.|.||:||..|...|  |.:|.                                     
  Fly   267 HRQR-HSGIKPHKCPECDATF--YTQKE------------------------------------- 291

  Fly   419 AEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHC 483
                                                         |..|:..|:.: .|..|..|
  Fly   292 ---------------------------------------------LSSHSICHTGR-MPCICEVC 310

  Fly   484 SKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEK 548
            .:..:....:..|::.|..|:|..|:||||||...:.|..|.:||..| :.|.|:|||..:..:|
  Fly   311 GRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNL-RPFVCDVCGSTFQRKK 374

  Fly   549 SLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQPLDDLINIVI 606
            :||:|:..|:.:..|.|.||.:.|.....|..|| ::|..::...|.:||...:.|.:
  Fly   375 ALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHM-RSHDPARVKGAVKPLPQSVTIEV 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 8/32 (25%)
COG5048 198..>508 CDD:227381 59/314 (19%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 3/19 (16%)
C2H2 Zn finger 305..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 338..359 CDD:275368 7/20 (35%)
C2H2 Zn finger 367..384 CDD:275368 5/16 (31%)
C2H2 Zn finger 400..420 CDD:275368 0/19 (0%)
C2H2 Zn finger 451..471 CDD:275368 2/19 (11%)
C2H2 Zn finger 480..500 CDD:275368 3/19 (16%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 565..582 CDD:275368 5/16 (31%)
CG18262NP_572453.1 C2H2 Zn finger 224..246 CDD:275368 6/21 (29%)
C2H2 Zn finger 251..271 CDD:275368 7/20 (35%)
COG5048 <256..415 CDD:227381 55/246 (22%)
zf-H2C2_2 263..288 CDD:290200 10/27 (37%)
C2H2 Zn finger 279..327 CDD:275368 12/132 (9%)
zf-H2C2_2 320..342 CDD:290200 9/21 (43%)
C2H2 Zn finger 335..355 CDD:275368 9/19 (47%)
C2H2 Zn finger 363..383 CDD:275368 8/19 (42%)
zf-C2H2 389..411 CDD:278523 8/22 (36%)
C2H2 Zn finger 391..411 CDD:275368 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449733
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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