DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and CG2116

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:431 Identity:95/431 - (22%)
Similarity:142/431 - (32%) Gaps:127/431 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 DDEIGQEDLEPAEEHQETETTKPTTTVSAETQP-----NNTASDPIEIFVDAVDIDEAEEEEEEE 160
            |:|..:|||:.......:....|....|...||     |:.....:..||...:.|:.:...:|.
  Fly   138 DNERVEEDLDMYPPSSPSLPPSPPRPPSPVVQPASKARNSARQIALRSFVSQKNNDDDDGSVKEV 202

  Fly   161 EQQQQYDEEVEEP-------------------------------ITDESAPPQL----------- 183
            :..::..||.:.|                               |.||..|.:.           
  Fly   203 KPSEKMLEEFKGPRRYMLFDDLIATIVDFDEDSTPLVEFSMISDIMDEKLPVECGICPDVMHKSK 267

  Fly   184 ------------TISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTV 236
                        |..|||.:|   .|.|:..:.|..|.. .|...:||.|..|...|.......|
  Fly   268 LSKHHKTHLVPGTNRYACIYC---TETYRDCKYLAGHAR-RHMGIRPYVCELCTLYFSTKQDLRV 328

  Fly   237 HLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYH-SETDFECALCEKRFYTRKSL-----NYHMK 295
            |.:..|:||:|.|.||||.:.....|:.|.|..| .:..|:|..|:|.:|...||     |.|| 
  Fly   329 HNQRRHLEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQCEYCQKAYYKNFSLQEHIRNVHM- 392

  Fly   296 WHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEH-------CGFCGKTFIHLKTLRW 353
              ...|..||...|          :.|.:| |.....||..|       |..|.:.|..:.....
  Fly   393 --GKRRMLKCPFCG----------MQCRDA-HKMARHRKEMHLSQGTYVCHLCQEEFTDISYFDA 444

  Fly   354 HIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQ------------P 406
            |       ::..:|.:.|..|.:        .:.:||.    ..||.:..|.            |
  Fly   445 H-------KRSIQCRSNTRRFVN--------ADGNREG----SDSESISGRNMNGQDDDYDGMGP 490

  Fly   407 FSSEPDLIHHMSAEHLQ--RPGAPIIANNKRVLQQKRERQY 445
            ...|.|....:..|..|  ..|:|   :|::.|.:. |:||
  Fly   491 LQEEYDEDDGLLVEDNQPEEQGSP---SNRQYLDES-EQQY 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 68/275 (25%)
C2H2 Zn finger 221..241 CDD:275368 5/19 (26%)
C2H2 Zn finger 249..269 CDD:275368 8/19 (42%)
C2H2 Zn finger 277..297 CDD:275368 9/24 (38%)
C2H2 Zn finger 305..327 CDD:275368 4/21 (19%)
C2H2 Zn finger 338..359 CDD:275368 4/20 (20%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 4/31 (13%)
C2H2 Zn finger 451..471 CDD:275368
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 508..528 CDD:275368
C2H2 Zn finger 537..557 CDD:275368
C2H2 Zn finger 565..582 CDD:275368
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 0/18 (0%)
C2H2 Zn finger 285..305 CDD:275368 6/23 (26%)
PHA00733 <308..357 CDD:177301 17/48 (35%)
C2H2 Zn finger 313..334 CDD:275368 5/20 (25%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
C2H2 Zn finger 370..388 CDD:275368 6/17 (35%)
C2H2 Zn finger 400..418 CDD:275370 5/28 (18%)
C2H2 Zn finger 429..447 CDD:275368 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449763
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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