DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8301 and Zfp354c

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_038950.3 Gene:Zfp354c / 30944 MGIID:1353621 Length:560 Species:Mus musculus


Alignment Length:569 Identity:148/569 - (26%)
Similarity:228/569 - (40%) Gaps:105/569 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LQFANWNLKISPN-DGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHIYDKIDASSL---EDDE 103
            |.|..|     |. :.||.|  .|..||..|....:....:.      :|.||....|   |..:
Mouse    84 LDFEIW-----PEIEALPPK--QDVLTKETSHGLIKNGSTKC------VYWKISFGELVKTECRD 135

  Fly   104 IGQEDLEP-----AEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEEEEEEEQQ 163
            |.||..:.     ||..:||.:...|.|.....:|         :|:....:  ::|.:..|...
Mouse   136 IAQEQEKKVHGPGAESPKETTSEDGTPTGFEPEKP---------LFISKALV--SQEGDPTESVP 189

  Fly   164 QQYDEEVEEPITDESAPPQLTISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARF 228
            ..|.       |.|...||       .|.|  ..::|:           :..::|:.|.||...|
Mouse   190 ATYH-------TSEKDLPQ-------DFDL--MRSFQM-----------YPGQKPHVCSECGKGF 227

  Fly   229 QDAASRTVHL---KSSHV-EKQHACGVCGKKYGDRHNLRHHVEKYHSETDFECALCEKRFYTRKS 289
                ::::||   |..|. ||.:.|..|||.:..|.:|..|...:..|..::|:.|||.|.:..:
Mouse   228 ----TQSLHLLEHKRLHTGEKPYKCSECGKSFSHRSSLLAHQRTHTGEKPYKCSECEKAFGSSST 288

  Fly   290 LNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWH 354
            |..|::.|..::.::||.  |.:.|.....|..|:..|:|   .|...|..|.|.|.....|..|
Mouse   289 LIKHLRVHTGEKPYRCRQ--CGKAFSQCSTLTVHQRIHTG---EKLYKCAECDKAFNCRAKLHRH 348

  Fly   355 IYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSA 419
             .|.|.||||||||.|.:.::.:..     |..|:...|..:..:|:.|.:.|:....||.|...
Mouse   349 -QRIHTGEKPYKCAECGKGYSQFPS-----LAEHQRLHTGEQLCQCLQCGRTFTRVSTLIEHQRI 407

  Fly   420 EHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCS 484
            ...|:|                       :||..|.:.||..|:...|..:|: .::.:.|..|.
Mouse   408 HTGQKP-----------------------YQCNECGKTFNQYSSFNEHRKIHT-GEKLYTCEECG 448

  Fly   485 KRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKS 549
            |.|....::..|.:.|..|||..|:.|||||:....||:|...| ..||.:||..||:||.:..:
Mouse   449 KAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIH-TGEKLYKCMECGKAYSYRSN 512

  Fly   550 LRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQPL 598
            |..|::.|..:..||.......|:....| |..||.....:|.:.:..|
Mouse   513 LCRHKKVHLKERLYKWKEYGTPFIYGSSL-TPYQKFLKGDKPENFNSSL 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 11/44 (25%)
COG5048 198..>508 CDD:227381 82/313 (26%)
C2H2 Zn finger 221..241 CDD:275368 7/22 (32%)
C2H2 Zn finger 249..269 CDD:275368 7/19 (37%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 338..359 CDD:275368 7/20 (35%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..582 CDD:275368 3/16 (19%)
Zfp354cNP_038950.3 KRAB 14..74 CDD:214630
KRAB 14..53 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..168 7/28 (25%)
COG5048 204..>543 CDD:227381 108/392 (28%)
C2H2 Zn finger 220..240 CDD:275368 7/23 (30%)
zf-H2C2_2 232..257 CDD:290200 10/24 (42%)
C2H2 Zn finger 248..268 CDD:275368 7/19 (37%)
zf-H2C2_2 260..283 CDD:290200 7/22 (32%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
zf-H2C2_2 289..313 CDD:290200 7/25 (28%)
C2H2 Zn finger 304..324 CDD:275368 6/21 (29%)
zf-H2C2_2 317..341 CDD:290200 9/26 (35%)
C2H2 Zn finger 332..352 CDD:275368 7/20 (35%)
zf-H2C2_2 347..369 CDD:290200 12/22 (55%)
C2H2 Zn finger 360..380 CDD:275368 5/24 (21%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
zf-H2C2_2 401..425 CDD:290200 9/46 (20%)
C2H2 Zn finger 416..436 CDD:275368 6/19 (32%)
zf-H2C2_2 428..451 CDD:290200 5/23 (22%)
C2H2 Zn finger 444..464 CDD:275368 5/19 (26%)
zf-H2C2_2 456..481 CDD:290200 11/24 (46%)
C2H2 Zn finger 472..492 CDD:275368 9/19 (47%)
zf-H2C2_2 485..509 CDD:290200 12/24 (50%)
C2H2 Zn finger 500..520 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.