DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp184

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_003751758.1 Gene:Zfp184 / 306966 RGDID:1304798 Length:739 Species:Rattus norvegicus


Alignment Length:643 Identity:169/643 - (26%)
Similarity:250/643 - (38%) Gaps:137/643 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NWNLKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHIY--DKIDASSLEDDEIGQEDL 109
            :|  ||.|.:               |::...|...|..|....:.  .|.|..|||..:..|:.|
  Rat   100 DW--KIRPEN---------------SVSPLELDISEEHLSSETVVTNSKRDDGSLEKLQANQQTL 147

  Fly   110 EPAEEHQETETTKPTTTVSAETQPNNTAS--DPIEIFVDAVDIDEAEEEEEEEEQQQQYDE--EV 170
            .     :|.:.|:.|...|.|.....:|.  ...:|.||....:...::.....|:::..:  |.
  Rat   148 P-----REVKITEKTMRPSYEKDLGVSAGLLTQTDIAVDQTSTNTRAKQSSRPGQKEKLCKCNEC 207

  Fly   171 EEPITDESA--PPQLTIS----YACKFCLRP---QEN-------------YQLQQL--------- 204
            .:..|..||  ..|.|.:    |.|..|.:.   .||             |:..|.         
  Rat   208 GKAFTYCSALIRHQRTHTGEKPYKCNDCNKAFSRNENLINHQRIHTGDKPYKCDQCGKGFIEGPS 272

  Fly   205 LLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKY 269
            |.:| ...|..|:||.|.||...|........|.:....||.:.|..|||.:..|.:...|.:.:
  Rat   273 LTQH-QRIHTGEKPYKCDECGKAFSQRTHLVQHQRIHTGEKPYTCNECGKSFSQRGHFMEHQKIH 336

  Fly   270 HSETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCR------------------HSG------- 309
            ..|..|:|..|||.|.....|..|.|.|..::.:||.                  |:|       
  Rat   337 TGEKPFKCEECEKTFTRSTHLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECN 401

  Fly   310 -CERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEV 373
             |.:.|....:|..|:.||:|   .|...|..|||.|.:..:|..|: :.|.|||||||::|.:.
  Rat   402 ECGKAFSQHSNLTQHQKTHTG---EKPYDCAECGKAFSYWSSLAQHL-KIHTGEKPYKCSDCGKA 462

  Fly   374 FASYA-----EKRIHM-------------------LERHRENLTAIERSECMLCRQPFSSEPDLI 414
            | ||.     .:|||.                   |.:|::..|..:..||..|.:.|.....|.
  Rat   463 F-SYCSSLTQHRRIHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLA 526

  Fly   415 HHMSAEHLQRP------------GAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERH 467
            .|......::|            |:.:|.:.|   ....||.|    :|..|.:.||.|..|.:|
  Rat   527 KHERIHTGEKPYQCLECGKTFSYGSSLIQHKK---IHTGERPY----KCNECERAFNQKIHLTQH 584

  Fly   468 AAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLE 532
            ..:|:.. :|:|||.|.|.|:....:..|.|||.:.|...|:.|.|.|:.|..||||:..| :.|
  Rat   585 KRIHTGV-KPYACPKCGKTFRHCSSLAQHQKTHTEGKHYQCNKCEKTFSQKSHLTQHQQVH-MGE 647

  Fly   533 KNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQ 590
            |.:|||.|.|.:.....|..||..|||:..|..::|.:.|..:..|..| ||.|:..:
  Rat   648 KPYKCNDCDRCFTQSTHLTEHQSIHTGEKPYSSNVCPQTFNQNTYLTQH-QKIHSGEK 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 8/39 (21%)
COG5048 198..>508 CDD:227381 103/393 (26%)
C2H2 Zn finger 221..241 CDD:275368 5/19 (26%)
C2H2 Zn finger 249..269 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 8/19 (42%)
C2H2 Zn finger 305..327 CDD:275368 7/47 (15%)
C2H2 Zn finger 338..359 CDD:275368 7/20 (35%)
C2H2 Zn finger 367..384 CDD:275368 7/21 (33%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 7/19 (37%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..582 CDD:275368 3/16 (19%)
Zfp184XP_003751758.1 KRAB 28..88 CDD:214630
COG5048 203..635 CDD:227381 117/445 (26%)
C2H2 Zn finger 204..224 CDD:275368 5/19 (26%)
C2H2 Zn finger 232..252 CDD:275368 4/19 (21%)
C2H2 Zn finger 260..280 CDD:275368 3/20 (15%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 6/19 (32%)
C2H2 Zn finger 344..364 CDD:275368 8/19 (42%)
C2H2 Zn finger 372..392 CDD:275368 1/19 (5%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
C2H2 Zn finger 428..448 CDD:275368 7/20 (35%)
C2H2 Zn finger 456..476 CDD:275368 6/20 (30%)
C2H2 Zn finger 484..504 CDD:275368 2/19 (11%)
C2H2 Zn finger 512..532 CDD:275368 5/19 (26%)
C2H2 Zn finger 540..560 CDD:275368 3/22 (14%)
C2H2 Zn finger 568..588 CDD:275368 7/19 (37%)
C2H2 Zn finger 596..616 CDD:275368 7/19 (37%)
C2H2 Zn finger 624..644 CDD:275368 9/19 (47%)
C2H2 Zn finger 652..672 CDD:275368 7/19 (37%)
C2H2 Zn finger 680..700 CDD:275368 6/20 (30%)
C2H2 Zn finger 708..728 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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