DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and sfc2

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_594670.1 Gene:sfc2 / 2542887 PomBaseID:SPAC144.09c Length:374 Species:Schizosaccharomyces pombe


Alignment Length:375 Identity:92/375 - (24%)
Similarity:138/375 - (36%) Gaps:70/375 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 CGKKYGDRHNLRHHVEKYHSETDFECAL--CEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLF 314
            |||||.....|..|:..:.:|..|.|..  |.|.||.:..|..|.:.|...:.|.|.:.||:..|
pombe    30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQF 94

  Fly   315 ISQRHLMCHEATHSGTSSRKSEHCGF--CGKTFIHLKTLRWHIYRQHGGEKPYKCA--NCTEVFA 375
            .:|:||..|...|   ...|...|.:  |.:.|...:.||.||...|....||.|.  :|...||
pombe    95 YTQQHLERHIEVH---RKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFA 156

  Fly   376 SYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQK 440
            :..:.:.|:...|.:.::.....|..:..:.|.....|.:|:...|:.                 
pombe   157 TKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVP----------------- 204

  Fly   441 RERQYSGLFQCGSCSQRFNMKSALERHAAVHS---EKDRPHACP--HCSKRFKRAQDMKWHIKT- 499
                     .|..|.::|...:.|..|..:|.   |:.:.:.||  .|.|.|.|:..:|.||.. 
pombe   205 ---------SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVI 260

  Fly   500 HEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFK--CNVCGRAYLFEKSLRLHQRTH----- 557
            ||......||.||..|..|::|.:| |.....:|..|  .|.||..:...:.:.:|.:..     
pombe   261 HEGNMAFHCDSCGTKFGYKHMLQRH-LERGTCKKAHKPYINECGIKHDGIEGVAIHDQKEKELSS 324

  Fly   558 --------------TGKTY-----YKCDL--CQERFVTHIKLKTHMQKAH 586
                          ||..|     |.|..  |..||.....:..|:...|
pombe   325 NLVSDVAKKIINEVTGHGYKEAREYSCSFPECNYRFKRLYDMHRHLNSHH 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 67/267 (25%)
C2H2 Zn finger 221..241 CDD:275368
C2H2 Zn finger 249..269 CDD:275368 7/16 (44%)
C2H2 Zn finger 277..297 CDD:275368 7/21 (33%)
C2H2 Zn finger 305..327 CDD:275368 8/21 (38%)
C2H2 Zn finger 338..359 CDD:275368 7/22 (32%)
C2H2 Zn finger 367..384 CDD:275368 4/18 (22%)
C2H2 Zn finger 400..420 CDD:275368 3/19 (16%)
C2H2 Zn finger 451..471 CDD:275368 5/19 (26%)
C2H2 Zn finger 480..500 CDD:275368 9/22 (41%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
C2H2 Zn finger 537..557 CDD:275368 4/19 (21%)
C2H2 Zn finger 565..582 CDD:275368 4/18 (22%)
sfc2NP_594670.1 COG5048 1..374 CDD:227381 91/373 (24%)
C2H2 Zn finger 28..47 CDD:275368 7/16 (44%)
C2H2 Zn finger 55..77 CDD:275368 7/21 (33%)
C2H2 Zn finger 85..107 CDD:275368 8/21 (38%)
C2H2 Zn finger 115..138 CDD:275368 7/22 (32%)
C2H2 Zn finger 146..165 CDD:275368 4/18 (22%)
C2H2 Zn finger 206..226 CDD:275368 5/19 (26%)
C2H2 Zn finger 238..261 CDD:275368 9/22 (41%)
C2H2 Zn finger 269..286 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1382
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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