DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8301 and Zfp53

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_038871.1 Gene:Zfp53 / 24132 MGIID:99200 Length:652 Species:Mus musculus


Alignment Length:601 Identity:156/601 - (25%)
Similarity:243/601 - (40%) Gaps:99/601 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PSEMAQIRLQFAN---------WNLKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHI 90
            |..|:|..|.|.:         |....|....|...:..:.::...|:..:.::      ...|.
Mouse    46 PLIMSQRLLTFGDVAVEFPQEEWECLDSAQRALYIDVMLENYSNLVSVENYCIS------DTVHQ 104

  Fly    91 YDKIDASSLEDDEIGQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEE 155
            :.|.:..|.:.:|:|:      ..|:.|.........:.||..|...|...:..||.::.|..:.
Mouse   105 HVKTEKESCQGNELGE------MLHEPTNCALYIRRDTIETSNNYRCSKDRDGSVDLLNQDRHKS 163

  Fly   156 EEEEEEQQQQYDEEVEEPITDESAPPQLTISYACKFCLRPQENYQ---------LQQLLLEHINA 211
            ....||..:  .|:.|:.::..|...:....||.. .|:.|..|.         :||.:      
Mouse   164 THTGEELCK--SEDCEKSLSLSSNLTENQRLYAAN-KLQSQGEYDDDFSSVYSLMQQTI------ 219

  Fly   212 SHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFE 276
             :..:.|:.|.:|...|..|:|.|||.:....:|.:.|.||||.:....||:.|...:..|..::
Mouse   220 -YIGDTPHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSVCGKSFTQCTNLKTHQRLHTGEKPYK 283

  Fly   277 CALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGF- 340
            |..|.|.|....:|..|.|.|..:|.:||:.  |::.|........|:.||     |..|||.. 
Mouse   284 CKECGKSFPQLSALKSHQKIHTGERPYKCKE--CDKSFAHCSSFRRHQKTH-----RAEEHCSCP 341

  Fly   341 -CGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHM-------------------- 384
             |||....|..||.| ||.|.|||||||..|...|..||..|.|.                    
Mouse   342 ECGKVLHQLSHLRSH-YRLHTGEKPYKCNECDRSFTYYASYRRHQKTHSLDKFYKCKECGKSFLE 405

  Fly   385 ---LERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYS 446
               |:||....|..:..:|.:|.:.|:....|..|:.....::|                     
Mouse   406 LSHLKRHYRIHTGEKPYKCEVCDKSFTVNSTLKTHLKIHTGEKP--------------------- 449

  Fly   447 GLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVC 511
              |:|..|.:.|...|.|.||.:||: .::|:.|..|.|.|.....::.|.|.|..|||..|..|
Mouse   450 --FKCRECDKSFTKCSHLRRHQSVHT-GEKPYRCKECDKSFTECSTLRAHQKIHTGEKPYKCREC 511

  Fly   512 GKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHI 576
            .|:|..:..|..|:..| ..|:.:.|..||:::....:|::||:.|||:..|||..|.:.|....
Mouse   512 DKSFIQRSNLIIHQRVH-TGERPYICKECGKSFTKCSTLQIHQKIHTGEKPYKCMECNKSFTQDS 575

  Fly   577 KLKTHMQKAHAASQPH 592
            .|:|| |:.|...:|:
Mouse   576 HLRTH-QRVHTGERPY 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 9/60 (15%)
COG5048 198..>508 CDD:227381 96/343 (28%)
C2H2 Zn finger 221..241 CDD:275368 8/19 (42%)
C2H2 Zn finger 249..269 CDD:275368 8/19 (42%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 4/21 (19%)
C2H2 Zn finger 338..359 CDD:275368 10/22 (45%)
C2H2 Zn finger 367..384 CDD:275368 6/16 (38%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..582 CDD:275368 5/16 (31%)
Zfp53NP_038871.1 KRAB 53..93 CDD:396083 5/39 (13%)
COG5048 223..627 CDD:227381 121/402 (30%)
C2H2 Zn finger 228..248 CDD:275368 8/19 (42%)
C2H2 Zn finger 256..276 CDD:275368 8/19 (42%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
C2H2 Zn finger 312..332 CDD:275368 4/21 (19%)
C2H2 Zn finger 340..360 CDD:275368 9/20 (45%)
C2H2 Zn finger 370..388 CDD:275368 6/17 (35%)
C2H2 Zn finger 396..416 CDD:275368 3/19 (16%)
C2H2 Zn finger 424..444 CDD:275368 5/19 (26%)
C2H2 Zn finger 452..472 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 6/19 (32%)
C2H2 Zn finger 536..556 CDD:275368 6/19 (32%)
C2H2 Zn finger 564..584 CDD:275368 7/20 (35%)
C2H2 Zn finger 592..612 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.