DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zkscan5

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_057892.2 Gene:Zkscan5 / 22757 MGIID:107533 Length:819 Species:Mus musculus


Alignment Length:763 Identity:171/763 - (22%)
Similarity:258/763 - (33%) Gaps:256/763 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HHPNCWPSEMA-----QIRLQFANWNLKISPNDGLPQKICSDCFTKFCSINAFRLAC-------- 80
            |||......:|     |..|:.....:..|| :.||||:.....|:    .:|...|        
Mouse   113 HHPESGEEAVAVIESIQRELEERRQQIATSP-EVLPQKMVPPGATQ----ESFSHQCLPVEAQPE 172

  Fly    81 QEAQ----------LKLSHIYDKIDASSLEDDEI--GQEDLEPAEE------------------- 114
            :|:|          |::|.:..| |:..|.|..:  |.:.|...|:                   
Mouse   173 RESQNLLEENALPVLQVSSVPLK-DSQELTDSLLSDGPQKLVKTEDVADVAVSFILEEWAHLDQS 236

  Fly   115 ------HQETETTKPTTTVSAETQPNN---------TASDPIEIFVDAVDIDEAEEEEEEEEQQQ 164
                  ....|..:.||.|..|.:..|         .|:||..:         |.|..|:...|:
Mouse   237 QKSLGRDSRKEDCESTTPVDYEPKEGNLEFTVQQVSDAADPHWV---------AAERTEKNGVQR 292

  Fly   165 QYDEEVEE--------PITDESAPPQL------------------TISYAC----KFCLRPQENY 199
            ....||.:        .:...|..|:.                  ...:.|    ||.|:.....
Mouse   293 PESGEVSDLKDMVPRWQVNPTSGNPRQKRPLRSGPDVNRKQKSNGERGHRCGDCGKFFLQASNFI 357

  Fly   200 QLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYG-DRHNLR 263
            |.:::        |..|:|:.|.||...:......|.|.:....||.:.|.||||.:. ..|.::
Mouse   358 QHRRI--------HTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPYKCQVCGKAFRVSSHLVQ 414

  Fly   264 HHVEKYHS-ETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCR--------------------- 306
            ||  ..|| |..:.|..|.|.|.....|..|:|.|..::..:|.                     
Mouse   415 HH--SVHSGERPYGCNECGKSFGRHSHLIEHLKRHFREKSQRCSDRRSKNTKLNIKQIPGLSEAD 477

  Fly   307 ----------------HS-GCERLFISQRHLM-------------CHEAT--HSGTSSRKSEH-C 338
                            || |||.....|..:|             |:|.:  |..:|..:..| |
Mouse   478 LELSGEVQRNACQAEGHSEGCEHQDGQQGVVMKETLGQSSSKRTDCNEFSYVHKKSSPGERPHQC 542

  Fly   339 GFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLC 403
            ..|||:||....|..| .|.|.||||::|..|.:   || .:|:|:.:.||.: |..:...|.||
Mouse   543 NECGKSFIQSAHLIQH-RRIHTGEKPFRCEECGK---SY-NQRVHLTQHHRVH-TGEKPYACHLC 601

  Fly   404 RQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHA 468
            .:.|.....|:.|.|....:||                       |:|..|.:.|..:|.|..|.
Mouse   602 GKAFRVRSHLVQHQSVHSRERP-----------------------FKCNECGKGFGRRSHLAGHL 643

  Fly   469 AVHSEKDRPHACPHCSKRFKR----------------------AQDMKWHI------KTHEKEKP 505
            .:|| :|:.|.|..|.:.|.:                      .:...|::      |...:|:|
Mouse   644 RLHS-RDKSHQCHECGEIFFQYVSLLEHQVLHVGQKSEKNGICEEAYSWNLTVIKDKKLELQEQP 707

  Fly   506 NVCDVCGKAFALKYVLTQHRLSHEVLE---------------------------KNFKCNVCGRA 543
            ..||.|||||:....|.||..:|...:                           |:.:||.|||.
Mouse   708 YQCDSCGKAFSYSSDLIQHYRTHSAEKPQKCDACRDSTCQCPHIKQQQKSCPSGKSHQCNECGRG 772

  Fly   544 YLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQP 591
            :..:..|..|||.|||:...:|..|...|.....|..|: ::|..:.|
Mouse   773 FSLKSHLSQHQRIHTGEKPLQCKECGMSFSWSCSLFKHL-RSHERTDP 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 18/80 (23%)
COG5048 198..>508 CDD:227381 93/393 (24%)
C2H2 Zn finger 221..241 CDD:275368 5/19 (26%)
C2H2 Zn finger 249..269 CDD:275368 8/20 (40%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 10/74 (14%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 5/16 (31%)
C2H2 Zn finger 400..420 CDD:275368 7/19 (37%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/47 (11%)
C2H2 Zn finger 508..528 CDD:275368 10/19 (53%)
C2H2 Zn finger 537..557 CDD:275368 9/19 (47%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Zkscan5NP_057892.2 SCAN 47..155 CDD:128708 12/42 (29%)
SCAN 47..134 CDD:280241 6/20 (30%)
KRAB 220..251 CDD:279668 1/30 (3%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..263 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..340 7/56 (13%)
COG5048 323..744 CDD:227381 108/460 (23%)
C2H2 Zn finger 343..363 CDD:275368 5/27 (19%)
zf-H2C2_2 355..380 CDD:290200 7/32 (22%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
zf-H2C2_2 383..406 CDD:290200 9/22 (41%)
C2H2 Zn finger 399..419 CDD:275368 8/21 (38%)
C2H2 Zn finger 427..447 CDD:275368 7/19 (37%)
zf-C2H2 540..562 CDD:278523 10/22 (45%)
C2H2 Zn finger 542..562 CDD:275368 9/20 (45%)
zf-H2C2_2 554..579 CDD:290200 12/29 (41%)
C2H2 Zn finger 570..590 CDD:275368 8/23 (35%)
zf-H2C2_2 582..605 CDD:290200 7/23 (30%)
C2H2 Zn finger 598..618 CDD:275368 7/19 (37%)
C2H2 Zn finger 626..646 CDD:275368 6/19 (32%)
C2H2 Zn finger 654..674 CDD:275368 3/19 (16%)
C2H2 Zn finger 710..730 CDD:275368 10/19 (53%)
C2H2 Zn finger 766..786 CDD:275368 9/19 (47%)
zf-H2C2_2 778..802 CDD:290200 9/23 (39%)
C2H2 Zn finger 794..814 CDD:275368 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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