DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Giot1

DIOPT Version :10

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_598247.1 Gene:Giot1 / 171090 RGDID:620184 Length:654 Species:Rattus norvegicus


Alignment Length:556 Identity:151/556 - (27%)
Similarity:235/556 - (42%) Gaps:115/556 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PQKICSDCFTKFCSIN-----AFRLA-CQEAQLKLSHIYDKIDASSLEDDE-----IGQEDLEPA 112
            |..:|      .||:|     .::.. |.:|            .|||:..|     .|.:..||.
  Rat   141 PSSLC------ICSVNHTVRKCYKCTQCSKA------------LSSLQRHEKTHLGRGIDKCEPC 187

  Fly   113 EEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEEEEEEEQQQQYDEEVEEPITDE 177
            ..|.        |...|..:.||                        ||...:|:      :.|:
  Rat   188 TNHH--------TYFQAHKRTNN------------------------EEDTYEYN------LCDK 214

  Fly   178 SAPPQLTISYACKFCLRPQENYQLQQ------LLLEHINASHDPEQPYNCPECEARFQDAASRTV 236
            :.....::.......:.|.:.||.::      .|.||  .:|..|:||.|.:|...|....:..:
  Rat   215 AFRSDSSLHQRPHLEVAPYKYYQYEKDFAHHSCLQEH--RTHTGEKPYKCNQCGKAFASRHNLKM 277

  Fly   237 HLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHS-ETDFECALCEKRFYTRKSLNYHMKWHNPD 300
            |.:....||.:.|..|||.:....|||.| ||.|: |..:||:.|.|.|..|..|..|.:.|..:
  Rat   278 HERIHTGEKPYTCNQCGKAFTLYTNLRKH-EKIHTGEKPYECSQCGKAFARRNELQVHERIHTGE 341

  Fly   301 RQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPY 365
            :.::|  |.|.:.|.|:.:|..||.||:|   .|...|..|||.|...:.|:.| .|.|.|||||
  Rat   342 KPYEC--SQCGKAFASRSNLQTHERTHTG---EKPYLCNQCGKAFAWRRLLQIH-ERIHTGEKPY 400

  Fly   366 KCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPII 430
            .|..|.:.|..:..     |..|::..|..:...|..|.:.|:       |:::.|         
  Rat   401 ACNQCGKAFTHFPS-----LHNHKKIHTGEKPYTCNECGKAFA-------HLTSFH--------- 444

  Fly   431 ANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHCSKRFKRAQDMKW 495
             |:|::  ...|:.|.    |..|.:.|:.:|.|:.|...| :.::||.|..|.|.|.....::.
  Rat   445 -NHKKI--HTGEKPYG----CKQCGKAFSFRSNLQIHETAH-KGEKPHECNQCGKAFAHIVYLQR 501

  Fly   496 HIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGK 560
            |.::| .:||..|:.|||.|.....|..|..|| ..||.::||.||:.:.:..:|:.|:|||||:
  Rat   502 HERSH-GDKPYECNQCGKGFTHFGRLKNHLKSH-TGEKPYECNQCGKVFAYRNNLQKHERTHTGE 564

  Fly   561 TYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQ 596
            ..|.||.|.:.|.:...|:.| :|.|...:|:..:|
  Rat   565 KPYVCDQCGKAFASRCNLQKH-EKIHTQEKPYVCNQ 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..88 CDD:462262 7/34 (21%)
COG5048 198..>508 CDD:227381 94/316 (30%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 9/19 (47%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 8/21 (38%)
C2H2 Zn finger 338..359 CDD:275368 8/20 (40%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
C2H2 Zn finger 451..471 CDD:275368 6/19 (32%)
C2H2 Zn finger 480..500 CDD:275368 5/19 (26%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
SUF4-like 536..>586 CDD:411020 19/49 (39%)
C2H2 Zn finger 537..558 CDD:411020 8/20 (40%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..586 CDD:411020 7/20 (35%)
C2H2 Zn finger 565..582 CDD:275368 5/16 (31%)
Giot1NP_598247.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 131..151 CDD:275368 4/15 (27%)
C2H2 Zn finger 159..176 CDD:275368 6/28 (21%)
C2H2 Zn finger 182..201 CDD:275368 5/26 (19%)
COG5048 258..654 CDD:227381 120/381 (31%)
C2H2 Zn finger 262..282 CDD:275368 4/19 (21%)
C2H2 Zn finger 290..310 CDD:275368 10/20 (50%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..366 CDD:275368 8/21 (38%)
C2H2 Zn finger 374..394 CDD:275368 8/20 (40%)
C2H2 Zn finger 402..422 CDD:275368 5/24 (21%)
C2H2 Zn finger 430..450 CDD:275368 7/38 (18%)
C2H2 Zn finger 458..478 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..506 CDD:275368 5/19 (26%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
C2H2 Zn finger 541..561 CDD:275368 7/19 (37%)
C2H2 Zn finger 569..589 CDD:275368 7/20 (35%)
C2H2 Zn finger 597..617 CDD:275368 1/3 (33%)
C2H2 Zn finger 625..645 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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