DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Zfp483

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_596913.1 Gene:Zfp483 / 170955 RGDID:727958 Length:733 Species:Rattus norvegicus


Alignment Length:354 Identity:95/354 - (26%)
Similarity:150/354 - (42%) Gaps:59/354 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 CPECEAR-FQDAASRTVHLKSSHVEKQHACGVCGK--KYGDRHNLRHHVEKYH---------SET 273
            |.:|... |||..|...  :.:..|:...|..|||  :||.:.::.......|         .:|
  Rat   419 CEKCRKNLFQDETSSKD--QEADTEEPRKCKKCGKALEYGSKRSVCVECRNAHKASPSLKPQGKT 481

  Fly   274 D-----FECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSR 333
            |     ::|..|.|||......:.|.:.|..::.:.|:|  |.|.|........|:..|:|   .
  Rat   482 DRRKKSYKCDECGKRFAEENDFSQHQRTHTREKPYVCKH--CGRAFSDNSSFCQHQRIHTG---E 541

  Fly   334 KSEHCGFCGKTFIHLKTLRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERS 398
            |...|..|||:|.|..:|..| .|.|.|||||||..|.:.|     ::...|.||::..|..:..
  Rat   542 KPYTCKECGKSFTHSSSLSKH-QRIHTGEKPYKCKECGKAF-----RQNSCLTRHQKIHTGEKPF 600

  Fly   399 ECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSA 463
            .|..|...|.....:::|......::|                       ::|..|.:.|...|.
  Rat   601 LCKECGLSFRLFSSIMYHQRLHKGEKP-----------------------YKCPHCEKGFPSHSR 642

  Fly   464 LERHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSH 528
            |.||..:|:.. :|:.|..|.|.|:::..:..||:||..|||..|:.||.||....:|.:|..:|
  Rat   643 LSRHLRIHTGA-KPYKCKECGKTFRQSSSLNLHIRTHTGEKPYKCNYCGAAFTRSTILVEHVKTH 706

  Fly   529 EVLEKNFKCNVCGRAYLFEKSLRLHQRTH 557
            ..::  :.|..||:::   ||...:.|.|
  Rat   707 TRVK--YDCKKCGKSF---KSRSANLRHH 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071
COG5048 198..>508 CDD:227381 80/303 (26%)
C2H2 Zn finger 221..241 CDD:275368 6/20 (30%)
C2H2 Zn finger 249..269 CDD:275368 6/21 (29%)
C2H2 Zn finger 277..297 CDD:275368 6/19 (32%)
C2H2 Zn finger 305..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
C2H2 Zn finger 537..557 CDD:275368 6/19 (32%)
C2H2 Zn finger 565..582 CDD:275368
Zfp483NP_596913.1 SCAN 46..127 CDD:396558
KRAB 176..229 CDD:214630
COG5048 <487..730 CDD:227381 78/282 (28%)
C2H2 Zn finger 490..510 CDD:275368 6/19 (32%)
C2H2 Zn finger 518..538 CDD:275368 6/21 (29%)
C2H2 Zn finger 546..566 CDD:275368 9/20 (45%)
C2H2 Zn finger 574..594 CDD:275368 6/24 (25%)
C2H2 Zn finger 602..622 CDD:275368 4/19 (21%)
C2H2 Zn finger 630..650 CDD:275368 7/19 (37%)
C2H2 Zn finger 658..678 CDD:275368 6/19 (32%)
C2H2 Zn finger 686..706 CDD:275368 7/19 (37%)
C2H2 Zn finger 713..730 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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