DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8301 and Gm12258

DIOPT Version :9

Sequence 1:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_001359510.1 Gene:Gm12258 / 108167848 MGIID:3651534 Length:627 Species:Mus musculus


Alignment Length:633 Identity:161/633 - (25%)
Similarity:248/633 - (39%) Gaps:131/633 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SHFLDLHHPNCWPSEMAQIRLQFANWNLKISPNDGLP---------------QKI--CSDCFTKF 70
            |..|.|:..:..|..:.::..:...|....:|:..||               |||  ||....| 
Mouse    42 SSLLSLNQCDAKPELILKLEKEAEPWKEDDAPDQSLPDMQNVDDRNEVSQDSQKIRRCSLVIAK- 105

  Fly    71 CSINAFRLACQEAQLKLSH-IYD----KIDASSLEDDEIGQED-----LEPAEEHQETETTKPTT 125
            .|::|.|....:| |..|| :.|    ...:|.:....:...|     .||:|.....|...|..
Mouse   106 SSVSAERAPAGKA-LSSSHRVLDLAIKNSTSSGMSPGPLNMRDRMLLPREPSEMQARKELGLPDV 169

  Fly   126 TVSAETQPNNTASDPIEIFVDAVDIDEAEEEEEEEEQQQQYDEEVE----EPITDESAPPQLTIS 186
            |..:...|     :|:.::          ...|.|||..||....|    :|:..:.|.|....|
Mouse   170 TRVSPRLP-----EPLSLY----------RSTECEEQHVQYCGPSEAFHVKPVWLQKAFPMSNPS 219

  Fly   187 YACKFCLRPQENYQLQQLLLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGV 251
            ..    ||.... :|::|.|.....:....|.:.|..|...|...:..|.||| .|.||:     
Mouse   220 SK----LRDYRK-ELEKLALPAKGETRAQVQTFECKVCGKLFCKNSHLTQHLK-MHKEKR----- 273

  Fly   252 C--GKKYGDRHNLRHHVEKYHS----ETDFECALCEKRFYTRKSLNYHMKWHNPDRQFKCRHSGC 310
            |  |.......|::..:.|:.|    |..:.|...||....:...:...|... |.:..|..:.|
Mouse   274 CYKGSNCEPILNIQPKLPKHQSLRAGEELYTCNGDEKYIRPKSGKSVQQKIIG-DGRIVCGKTEC 337

  Fly   311 ERLFIS-QRHLMCHEATH----SGTSSRKSE--------------HCGFCGKTFIHLKTLRWHIY 356
            .:|..| :::.:.||.||    :|.:.|||:              .|..|||||.|..    |:|
Mouse   338 SKLNCSVEQNPLKHEETHEFSLAGKTVRKSDLHQLETPHRYERVYECSACGKTFSHTP----HVY 398

  Fly   357 RQHGGEKPYKCANCTE---VFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIHHMS 418
            ...|.||||:|.:|.:   |.:..|.             |..:|..|.:|.:.|.....|..|..
Mouse   399 SPSGAEKPYECEDCQQSKLVVSQPAP-------------TQEKRYVCNVCGKAFYKRAHLHAHQR 450

  Fly   419 AEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKSALERHAAVHSEKDRPHACPHC 483
            ....::|                       :.|..|.:.|.:||.|..|..:|: .::|.||..|
Mouse   451 THTGEKP-----------------------YDCQECGKSFRLKSFLVVHQRIHT-GEKPFACDTC 491

  Fly   484 SKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCGRAYLFEK 548
            .|.||:...:..||:.|..|||..|..|.|:|.||..||.|:.:|.. ||.::|:|||:::....
Mouse   492 GKSFKQRTSLYTHIRIHTGEKPYECKECRKSFILKSYLTVHQRTHSG-EKPYECDVCGKSFKQNS 555

  Fly   549 SLRLHQRTHTGKTYYKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQ 596
            .|..|:||||.:..|:|.:|.:.:.....|.|| :|.|.:.:|:...|
Mouse   556 HLHAHKRTHTSEKPYECIVCGKSYKQSPSLYTH-KKIHTSEKPYECKQ 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 19/80 (24%)
COG5048 198..>508 CDD:227381 84/337 (25%)
C2H2 Zn finger 221..241 CDD:275368 7/19 (37%)
C2H2 Zn finger 249..269 CDD:275368 3/21 (14%)
C2H2 Zn finger 277..297 CDD:275368 4/19 (21%)
C2H2 Zn finger 305..327 CDD:275368 6/22 (27%)
C2H2 Zn finger 338..359 CDD:275368 9/20 (45%)
C2H2 Zn finger 367..384 CDD:275368 4/19 (21%)
C2H2 Zn finger 400..420 CDD:275368 5/19 (26%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 480..500 CDD:275368 7/19 (37%)
C2H2 Zn finger 508..528 CDD:275368 9/19 (47%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Gm12258NP_001359510.1 KRAB 8..67 CDD:214630 4/24 (17%)
C2H2 Zn finger 249..269 CDD:275370 7/20 (35%)
C2H2 Zn finger 384..424 CDD:275368 17/43 (40%)
COG5048 <412..608 CDD:227381 64/230 (28%)
C2H2 Zn finger 432..452 CDD:275368 5/19 (26%)
C2H2 Zn finger 460..480 CDD:275368 7/19 (37%)
C2H2 Zn finger 488..508 CDD:275368 7/19 (37%)
C2H2 Zn finger 516..536 CDD:275368 9/19 (47%)
C2H2 Zn finger 544..564 CDD:275368 7/19 (37%)
C2H2 Zn finger 572..592 CDD:275368 6/20 (30%)
zf-C2H2 598..620 CDD:333835 1/5 (20%)
C2H2 Zn finger 600..620 CDD:275368 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24377
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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